Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00241 ATGGAGAAAGCAAACAACACATCATTAGTGAGAACAAAATCTGATCAGTTAGTGGAGTCTATGGTGGCGGCGATGAAGTCGCCGCCGTCGAGCGACCACTCTGCGAACGGGGTGGTGGAAGGTGGCGGCACCCTGTCGAGGAAGTCGAGCCGGCGGCTGACCGGCGCGTCACCGGGACGCGGCGGCGGAGGGAAGAACACTCACATAAGAAAGTCTAGAAGTGCTCAAATAAGCCAAATGAAGTTGGATTTTGATGATCTGAGCAGTGGTGCAGCACTTAGCAGAGCCTCAAGTGCTAGCTTGGGACTCTCTTTCTCCTTCACTGGCTTCACCATGCCTCCTGAAGAAATCGCTGACTCCAAACCCTTCAGCGATGATGATATTCCTGAAGATATCGAAGCTGGACCTAGGACAAAGTTTCAAACGGAACCTACTCTACCCATATTTCTCAAGTTCACAGATGTGAGCTACAAGGTAGTGATCAAAGGCATGACAACAACTGAGGAGAAGGATATCTTGAATGGGATAACTGGTTCTGTAAATCCAGGGGAAGTTTTGGCATTGATGGGTCCCTCAGGAAGTGGAAAAACAACCCTTTTAAACCTTCTTGGAGGCAGGTTATGCCATCCTATAAGTGGTGGATCTATCACTTACAATGATCAACCATACTCTAAGTTCCTTAAGAGCAGGATAGGATTTGTGACACAAGATGATGTTCTGTTTCCTCACTTAACTGTGAAAGAGACTTTGACATACGCAGCCAGGCTAAGGCTTCCAAAGACATTCACAAAGGAGCAGAAGGAAAAACGAGCTTTGGATGTAATCTATGAGCTTGGCTTGGAGAGGTGCCAAGACACTATGATTGGAGGTTCCTTTGTGCGTGGAGTATCTGGTGGTGAGAGGAAGAGAGTTTGTATTGGAAATGAGATCATAATCAACCCTTCTCTTCTTTTTCTTGATGAACCAACATCTGGTTTGGATTCCACAACAGCCTTGAGGATCGTTCAGATGCTACAAGACATAGCAGAGGCTGGTAAAACAGTGGTGACGACAATTCACCAACCATCAAGCAGACTCTTTCACAAATTTGACAAGTTGATCCTTCTTGGAAAAGGGAGCTTGCTTTACTTTGGAAAAGCATCAGAAGCAATGACTTACTTCCAGTCTATTGGATGCTCACCACTTATTTCCATGAACCCAGCAGAGTTTTTGCTAGACCTTGCCAATGGAAACATAAATGATGTTTCCCTACCCTCAGAGTTGGAAGATAGAGTACACATGGAAAATGCAGAAGCAGAAACACCAAATGGGAAACCATCACCAGCAGTTGTACACGAGGCAGGATTGCTATTCTTCATTGCCGTTTTCTGGGGATTTTTTCCTGTTTTCACTGCAATATTCACATTTCCTCAAGAAAGAGCCATGTTGAGTAAGGAGAGAGCAGCAGATATGTACAGACTAAGTGCATACTTCTTGGCTAGAACCACCAGTGACCTTCCACTTGACCTCATTTTACCAGTGCTTTTTCTACTTGTTGTTTATTTCATGGCCGGTCTCAGACTCAGTGTTGCACCATTTTTCCTCACCATTCTCACTGTCTTCCTCTGCATAGTGGCTGCTCAGGGACTTGGACTTGCTATTGGAGCCACATTAATGGACTTGAAAAGAGCAACAACTTTAGCTTCAGTTACTGTGATGACTTTCATGCTGGCTGGAGGATTTTTTGTACAGAGAGTCCCCATATTTTTTTCATGGATCCGGTACATGTCTTTCAACTACCACACCTACAAACTTCTGCTGAAGGTGCAATATGAACACATTTCACCAATCATAAATGGTATCAGAATTGATAGTGGTGCAACAGAGGTAGCTGCTCTAATAGTCATGGTTTTTGGCTACCGTTTCTTGGCATATCTTTCTCTCAGGAGAATGAAACTTCAATCAGGGGCTTAA 1953 0.446 MEKANNTSLVRTKSDQLVESMVAAMKSPPSSDHSANGVVEGGGTLSRKSSRRLTGASPGRGGGGKNTHIRKSRSAQISQMKLDFDDLSSGAALSRASSASLGLSFSFTGFTMPPEEIADSKPFSDDDIPEDIEAGPRTKFQTEPTLPIFLKFTDVSYKVVIKGMTTTEEKDILNGITGSVNPGEVLALMGPSGSGKTTLLNLLGGRLCHPISGGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPKTFTKEQKEKRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMTYFQSIGCSPLISMNPAEFLLDLANGNINDVSLPSELEDRVHMENAEAETPNGKPSPAVVHEAGLLFFIAVFWGFFPVFTAIFTFPQERAMLSKERAADMYRLSAYFLARTTSDLPLDLILPVLFLLVVYFMAGLRLSVAPFFLTILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVQRVPIFFSWIRYMSFNYHTYKLLLKVQYEHISPIINGIRIDSGATEVAALIVMVFGYRFLAYLSLRRMKLQSGA 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00241 650 Pfam ABC-2 type transporter 353 413 IPR043926 GO:0140359
Viun7g00241 650 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 150 396 IPR003439 GO:0005524
Viun7g00241 650 MobiDBLite consensus disorder prediction 1 15 - -
Viun7g00241 650 Pfam ABC-2 type transporter 445 604 IPR013525 GO:0016020|GO:0140359
Viun7g00241 650 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 129 419 - -
Viun7g00241 650 MobiDBLite consensus disorder prediction 1 75 - -
Viun7g00241 650 Gene3D - 149 390 IPR027417 -
Viun7g00241 650 FunFam ABC transporter G family member 22 160 390 - -
Viun7g00241 650 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 388 IPR027417 -
Viun7g00241 650 SMART AAA_5 182 373 IPR003593 GO:0016887
Viun7g00241 650 ProSitePatterns ABC transporters family signature. 296 310 IPR017871 GO:0005524|GO:0016887
Viun7g00241 650 Pfam ABC transporter 173 324 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00241 Viun-Chr7 1661342 1670274 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00241 172 410 Calmodulin-binding Proteins AT2G36910 29.796 2.72e-16 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00241 K05681 - gmx:100798801 808.905