Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00229 ATGGAGGTTCCAGAAATGGGAGGCAAGACTGAAAGCCGTTTGACATCGGCAGCAGCCTTTGTGGAAGGGGGGATTCAAGACGCATGTGATGATTCTTGCAGCATATGCCTTGAAAATTTTAGCAAAAGTGATCCTGCAACTGTCACTAATTGCAGGCATGACTTCCATCTGCAGTGCATTCTTGAATGGTGCCAGAGAAGCTCTCAATGCCCTATGTGTTGGCAAGCTATCAGCTTGAAGGATGCTACCAGTCAAGAACTGCTCGAGGCAGTAGAGCAGGAGAGGAGCTTGAGGAATATGCCATCCAGAAATGCTTCAATTTTTCATCTTTCGCAGCACGAATTTCAGCGTTTACCAGTGGAGCGTGATTCTGATATTGAAGAGCGAATCCTTCGACATTTAGCTGCTGCAGCATCAATGAGGAGAGCACACCCTCTTGGTCGGAGGGAAAGTCAACGATCTAGGTCATCTTCTCTTGGCAATGTACACTCCTTTGTGTACGCAACTCATCCTAGTGCACCTCCATCAGTTACTGGAGGGGGAAGTGAACCAGCTGCAATTCCTGCAGGAAATCCATCTGCTCCTCTTATATTTGATGGAACACAGCAATCATCACCACAGCAGAGGCCCCTAGTACAAACTCGGAGTTCTTCTTTTACTTCTGCCTCTACGGTCCCAACAACAAATCTTCAACGAGCTCACTCCAATGGCTTTGCCTCTCATTCCTTGCCTGCAAGCCATGATGAACCACAGCCATCAGAACAATCATTCTCAGATTCTCTCCTTTCCAAATTTAATGCAGTATCCATGAGATACAAAGAATCAATTTCAAAGGGCACAAGGGGATGGAAGGAGAGGCTGTTCTCTCCTAATTCTTCTGTGTCAGAACTTGGTTCTGAAGTTAGGAGAGAACTGAATGCCAAAATTGCTAGTGTGTCCCGATTGATTGAGCGCCTTGAAACTGCAAGAGAAAATAAGAACGCTGCAGGCACTTCTGTATCAAATCATTCCGTTGCAGAGACCAGCAACAACCAAAACAATGTGGAAGTTCATGGAGAGAACTCTTTTCCTGGCAGTAATTCTTCTGCTACTTTTTCTGCCGTCCCAGATTCAAAGCAAGCACTTGCTCAGATATGA 1137 0.4582 MEVPEMGGKTESRLTSAAAFVEGGIQDACDDSCSICLENFSKSDPATVTNCRHDFHLQCILEWCQRSSQCPMCWQAISLKDATSQELLEAVEQERSLRNMPSRNASIFHLSQHEFQRLPVERDSDIEERILRHLAAAASMRRAHPLGRRESQRSRSSSLGNVHSFVYATHPSAPPSVTGGGSEPAAIPAGNPSAPLIFDGTQQSSPQQRPLVQTRSSSFTSASTVPTTNLQRAHSNGFASHSLPASHDEPQPSEQSFSDSLLSKFNAVSMRYKESISKGTRGWKERLFSPNSSVSELGSEVRRELNAKIASVSRLIERLETARENKNAAGTSVSNHSVAETSNNQNNVEVHGENSFPGSNSSATFSAVPDSKQALAQI 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00229 378 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 22 81 - -
Viun7g00229 378 MobiDBLite consensus disorder prediction 170 259 - -
Viun7g00229 378 ProSiteProfiles Zinc finger RING-type profile. 33 73 IPR001841 -
Viun7g00229 378 SMART ring_2 33 73 IPR001841 -
Viun7g00229 378 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 15 83 IPR013083 -
Viun7g00229 378 SUPERFAMILY RING/U-box 26 80 - -
Viun7g00229 378 MobiDBLite consensus disorder prediction 196 259 - -
Viun7g00229 378 MobiDBLite consensus disorder prediction 139 158 - -
Viun7g00229 378 MobiDBLite consensus disorder prediction 326 378 - -
Viun7g00229 378 FunFam E3 ubiquitin-protein ligase RHF2A isoform X1 11 83 - -
Viun7g00229 378 Pfam Ring finger domain 31 73 IPR001841 -
Viun7g00229 378 Coils Coil 302 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00229 Viun-Chr7 1599689 1603611 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00229 30 81 C3H Transcription Factor Family AT4G00335 42.308 5.49e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00229 K19043 - gmx:100803582 535.798