Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00223 ATGGGAAACACCTGTGTTGGATCGAGAACCTCTACTTCTAATGGCGGAACTCGTGGCTCTAGTTCATACTGGTGGTGTCGTGGACACAAGAAAGATTCTTCTCATGCACACAAAGGGGGCAAAAAGAACGCAAAAGCCATAGACGCAATTCAAGACAAGCCTCCAGAGGTAATGAAAATTGAGAGCGATGAGGTGAGGCCTCCTCATCAAGCCATGGAGACTAAACCAGCTCCGGACCAAACAAGGGCGGCGCAGCCCCAAAAACCGAAGAGACCACCCAATGTGAGGAAGCCAGCAAGTGCAGGCCTCAAAGCAGATTCTGTTTTGCTGAGGAAAACCGGGCACCTTAAGGATAGTTACAATTTGGGACCAAAGCTTGGACAAGGCCAATTCGGAACTACTTTCCTTTGTGTGGAGAAGGCCACTGGGAAAGAGTATGCATGCAAGTCCATATTGAAGAGGAAGCTGGTGACAGAGGAGGATGTGGAGGATGTGAGGAGGGAAATTCAGATAATGCACCACTTGGCAGGGAGTCCTAATGTGATCTCAATCAAGGAGGCTTTTGAGGATGCTGTTTCAGTTCATGTTGTTATGGAGCTCTGTGCTGGGGGTGAGCTCTTTGATAGGATTGTTGAAAGAGGGCATTACACTGAGAGAAAAGCAGCCAAGCTTGCAAGAACAATAGTTGGTGTCATTGAGTCTTGCCACTCTCTTGGAGTCATGCATAGGGATCTTAAGCCTGAGAATTTTCTCTTTGTTAATCAACAAGAAGAAGCCCCTCTCAAGGCAATAGACTTTGGACTTTCTGCTTTTTTCAAACCAGGTGAAATTTTCAATGATGTAGTAGGAAGTCCCTATTATGTAGCACCTGAAGTTCTGCGCAAACGTTATGGCCCTGAAGCAGATGTATGGAGTGCTGGTGTCATTATATACATTCTCTTATGTGGGGTGCCTCCATTTTGGGGAGAAACGGAGCAAGAAATATTCGACGCAATTTTGCATTTTCAACTCGATTTCACATCGGATCCATGGCCTTCCATATCTGCAAGTGCAAAAGACTTGGTTAGGAAGATGCTTGTCAGAGACCCTAGTAAACGGATATCAGCTTTTGACGTTCTTCGTCACCCCTGGATTCAAGTTGATGGAGAAGCTCCTGACAAGCCTCTTGATTCTGCAGTTTTAAGTCGCCTAAAGCAGTTTTATGCAATGAACAAACTCAAGAAAATGGCTCTCAGAGTTATAGCACAGAATCTCTCTGAAGAAGAAATTGCAGGGTTGAAAGAGATGTTTAAGACGATAGACACAGACAACAGTGGTCAAATTACTTTTGAAGAACTCAAGGTTGGACTGAAAAAGTTTGGTGCTAATCTCAATGAATCTGAGATTTACGACCTTATGCAAGCAGCAGATGTTGATAACAGTGGCACAATTGACTACGGAGAATTCATAGCTGCAACATTGCATCTGAACAAGGTTCAAAGAGAAGATCATTTAGTTGCAGCTTTTGCTTATTTCGATAAAGATGGAAGTGGCTACATCACTCAAGATGAACTTCAACAAGCTTGCGAAGAATTTGGCATTGGAGATGTTCCCTTGGAGGAAATGATCCGAGAAGCTGATCAAGATAATGATGGAAGAATAGACTACAATGAATTTGTGGCTATGATGCAGAAAGGAAATGCAGATTTGGGTAAGAAGGGTCGAAAGGGTAGCACTAGTTTTAGAATTGGATTTAGGGAGGCACTACCGGTGTGTTAA 1758 0.4386 MGNTCVGSRTSTSNGGTRGSSSYWWCRGHKKDSSHAHKGGKKNAKAIDAIQDKPPEVMKIESDEVRPPHQAMETKPAPDQTRAAQPQKPKRPPNVRKPASAGLKADSVLLRKTGHLKDSYNLGPKLGQGQFGTTFLCVEKATGKEYACKSILKRKLVTEEDVEDVRREIQIMHHLAGSPNVISIKEAFEDAVSVHVVMELCAGGELFDRIVERGHYTERKAAKLARTIVGVIESCHSLGVMHRDLKPENFLFVNQQEEAPLKAIDFGLSAFFKPGEIFNDVVGSPYYVAPEVLRKRYGPEADVWSAGVIIYILLCGVPPFWGETEQEIFDAILHFQLDFTSDPWPSISASAKDLVRKMLVRDPSKRISAFDVLRHPWIQVDGEAPDKPLDSAVLSRLKQFYAMNKLKKMALRVIAQNLSEEEIAGLKEMFKTIDTDNSGQITFEELKVGLKKFGANLNESEIYDLMQAADVDNSGTIDYGEFIAATLHLNKVQREDHLVAAFAYFDKDGSGYITQDELQQACEEFGIGDVPLEEMIREADQDNDGRIDYNEFVAMMQKGNADLGKKGRKGSTSFRIGFREALPVC 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00223 585 FunFam Calcium-dependent protein kinase 1 122 205 - -
Viun7g00223 585 Gene3D Transferase(Phosphotransferase) domain 1 206 402 - -
Viun7g00223 585 SUPERFAMILY Protein kinase-like (PK-like) 118 379 IPR011009 -
Viun7g00223 585 CDD STKc_CAMK 120 377 - -
Viun7g00223 585 ProSitePatterns EF-hand calcium-binding domain. 540 552 IPR018247 -
Viun7g00223 585 Gene3D Phosphorylase Kinase; domain 1 123 205 - -
Viun7g00223 585 ProSiteProfiles EF-hand calcium-binding domain profile. 421 456 IPR002048 GO:0005509
Viun7g00223 585 ProSiteProfiles EF-hand calcium-binding domain profile. 493 528 IPR002048 GO:0005509
Viun7g00223 585 SMART serkin_6 120 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00223 585 SUPERFAMILY EF-hand 417 558 IPR011992 -
Viun7g00223 585 ProSitePatterns EF-hand calcium-binding domain. 434 446 IPR018247 -
Viun7g00223 585 MobiDBLite consensus disorder prediction 1 21 - -
Viun7g00223 585 ProSitePatterns Protein kinases ATP-binding region signature. 126 153 IPR017441 GO:0005524
Viun7g00223 585 Pfam Protein kinase domain 120 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00223 585 ProSiteProfiles EF-hand calcium-binding domain profile. 457 492 IPR002048 GO:0005509
Viun7g00223 585 MobiDBLite consensus disorder prediction 1 104 - -
Viun7g00223 585 FunFam Calcium-dependent protein kinase SK5 206 390 - -
Viun7g00223 585 PANTHER SERINE/THREONINE-PROTEIN KINASE 110 552 - -
Viun7g00223 585 ProSitePatterns EF-hand calcium-binding domain. 470 482 IPR018247 -
Viun7g00223 585 MobiDBLite consensus disorder prediction 39 70 - -
Viun7g00223 585 CDD EFh 497 557 IPR002048 GO:0005509
Viun7g00223 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Viun7g00223 585 FunFam Calcium-dependent protein kinase 1 386 560 - -
Viun7g00223 585 Pfam EF-hand domain pair 439 488 IPR002048 GO:0005509
Viun7g00223 585 ProSiteProfiles EF-hand calcium-binding domain profile. 532 562 IPR002048 GO:0005509
Viun7g00223 585 Gene3D - 403 562 - -
Viun7g00223 585 Pfam EF-hand domain pair 498 557 IPR002048 GO:0005509
Viun7g00223 585 ProSiteProfiles Protein kinase domain profile. 120 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun7g00223 585 ProSitePatterns EF-hand calcium-binding domain. 506 518 IPR018247 -
Viun7g00223 585 SMART efh_1 531 559 IPR002048 GO:0005509
Viun7g00223 585 SMART efh_1 425 453 IPR002048 GO:0005509
Viun7g00223 585 SMART efh_1 497 525 IPR002048 GO:0005509
Viun7g00223 585 SMART efh_1 461 489 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00223 Viun-Chr7 1572865 1576817 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00223 1 576 EF-hand Containing Proteins AT3G10660 63.199 0.0 809
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Viun7g00223 Pkinase 8.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00223 K13412 - gmx:100783079 1018.84