Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00197 ATGGGTTTCCGTTTACCAGGTATCAGAAAGACTTTATCCGCCAGAAATCAAGCATCTTCAAAAGTGGTGGACGCGCCAAAGGGCTATCTTGCAGTATATGTGGGAGAGAATATGAAACGGTTTGTGATTCCTGTATCACACTTAAACCAGCCTCTATTCCAAGACCTGCTGTGTCAAGCAGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACAATTCCTTGCAGCGAAGATGTCTTCCAACATATAACTTCTTGTTTGAATGCACAATAA 279 0.4337 MGFRLPGIRKTLSARNQASSKVVDAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLCQAEEEFGYDHPMGGLTIPCSEDVFQHITSCLNAQ 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00197 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 18 89 IPR003676 GO:0009733
Viun7g00197 92 Pfam Auxin responsive protein 15 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00197 Viun-Chr7 1439328 1439958 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00197 24 89 Calmodulin-binding Proteins AT3G43120 53.030 4.68e-21 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00197 K14488 - gmx:100820621 168.703