Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00193 ATGGGCTTTCGTTTGCCTGGTATCAGAAAGACTTTATCTGCCAGAAATCAAGCATCTTCAAAAGGGTTGGATGCACCAAAGGGCTACCTTGCAGTGTATGTGGGAGAGGATATGAAACGATTTGTGATTCCTGTATCACACTTGAACCAACCTCTATTCCAAGACTTGTTGAGTAAAGCAGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACAATTCCTTGCACCGAAGATGTCTTCGAACATATAATTTCTTGTTTGAGTGCACAATAA 279 0.4229 MGFRLPGIRKTLSARNQASSKGLDAPKGYLAVYVGEDMKRFVIPVSHLNQPLFQDLLSKAEEEFGYDHPMGGLTIPCTEDVFEHIISCLSAQ 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00193 92 Pfam Auxin responsive protein 14 89 IPR003676 GO:0009733
Viun7g00193 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 19 88 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00193 Viun-Chr7 1426186 1426811 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00193 24 89 Calmodulin-binding Proteins AT3G43120 54.545 2.53e-22 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00193 K14488 - gmx:100820621 162.155