Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00150 ATGTTGCAGGATGTTATCCAACCCCCTACACCAGATGAGCAACAACAACTCCCCATTGAAGAGATTTCAAGCCCATTCGGTGGTCGATATTTCGAACTTTGTGACCCTGATCTTTTCCCAGACACACTGCAAATTTCTGAGGTTACCTCCAGCTCAAATTGTTGCCATGAAGACAAGTCCTCATATGCCACAACCATATCTCCACCTTTAGATGCAGTAGACAACAAGATCAATATCAATAGCAATAGCAACATAGTCACCACCTCATCTAGTACTACCACAGCCAGCACCACTACCAACAACAACAACAACAACAACAACAACCTCAACAACAGCAACAACAACAACAATAACAACAACACAACAAACAGCAATAACCTGTCTCTCTTCTTTGACTCTCAAGATGAATTTGACAATGACATATCAGCCTCCATAGACTTCTCATCTTCTCCTTCTTTTGCTGTTCCACCACTTCTCCCAATCACAACTCAGCAGGATCACTTTGATTTCTCTTCAGCTCAGCAACAGCTGCATCTATCAGCATCAGGATCAGTTTTGAAGGGCCTCTCTCAGTACCCTACTGATCCTGTGGTTGCACCCCTTATTGGGGCTCCATTAGCATCAGTTTTTGATGATGATTGCATCTCTTCCATCCCTTCTTATGTGCCTCTCAACCCTTCATCTCCCTCTTGCTCTTATCTCAGTCCTGGCATAGGAGCCTACATGACTCCTCCTGGTTCCCTTGCCACTGCTTTATCTGCTGACAGTTCTGGATTGTTTGGTGGGAACATTCTACTGGGGTCTGAACTGCAGGCACAAGAATTGGACTACCAGGGAGAAAATGGTGGAATATATTGTACAGATTCAATTCAGAGGGTGTTTAACCCCCCAGAACTTCAGGCACTTGGTAATGAGAGTCAGAAACTGGTATCTGCTGGGGGCTCTGGCACTTTGGCACCAGAAATTTCACACTTGGAGGACTCTACCCTGAAGGTTGGAAAACTTTCTGTTGAGCAGAGGAAGGAAAAGATTCACAGATACATGAAGAAGAGAAATGAAAGAAACTTCAGCAAGAAAATCAAGTATGCTTGCCGCAAAACTTTGGCAGATAGCAGGCCACGGGTGAGAGGAAGGTTTGCAAAGAATGATGACTTTGGAGATAGCCATAGACAAGGAAGTAGCAACCATGAAGAAGATGATGAAGAGATAATTGTGAAAGAAGATGATGATTTGGTTGATTCCTCAGATATCTTTGCACATATCAGTGGAGTGAACTCTTTCAAATGCAACTATTCCATTCAGTCCTTGATTTGA 1314 0.4353 MLQDVIQPPTPDEQQQLPIEEISSPFGGRYFELCDPDLFPDTLQISEVTSSSNCCHEDKSSYATTISPPLDAVDNKININSNSNIVTTSSSTTTASTTTNNNNNNNNNLNNSNNNNNNNNTTNSNNLSLFFDSQDEFDNDISASIDFSSSPSFAVPPLLPITTQQDHFDFSSAQQQLHLSASGSVLKGLSQYPTDPVVAPLIGAPLASVFDDDCISSIPSYVPLNPSSPSCSYLSPGIGAYMTPPGSLATALSADSSGLFGGNILLGSELQAQELDYQGENGGIYCTDSIQRVFNPPELQALGNESQKLVSAGGSGTLAPEISHLEDSTLKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGDSHRQGSSNHEEDDEEIIVKEDDDLVDSSDIFAHISGVNSFKCNYSIQSLI 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00150 437 MobiDBLite consensus disorder prediction 82 127 - -
Viun7g00150 437 ProSiteProfiles CCT domain profile. 340 382 IPR010402 GO:0005515
Viun7g00150 437 MobiDBLite consensus disorder prediction 376 400 - -
Viun7g00150 437 Pfam CCT motif 340 382 IPR010402 GO:0005515
Viun7g00150 437 MobiDBLite consensus disorder prediction 376 402 - -
Viun7g00150 437 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 84 395 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00150 Viun-Chr7 985212 989712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00150 340 398 C2C2-CO-like Transcription Factor Family AT5G57660 46.875 1.14e-11 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Viun7g00150 CCT 5.8e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00150 - - gmx:100793417 638.647