Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00134 ATGGACCTTTCCATCAACGAGAGAAGCTTCGGCAGAGAAAGAGAAGAGGAAGAGGAAGAAGATAGAGACAACGGCGATGAACCCAAAGAGGGTGCAGTGGAGGTTGGAACCCGCAGGCCCAGAGGGAGACCACCGGGCTCCAAGAACAAGCCCAAACCACCCATCTTTGTCACCAGGGACAGCCCGAACTCCCTCAGAAGCCATGTCATGGAGGTTGCCGGTGGCGCCGACGTCGCCGAAAGCGTCGCCCAGTTCGCTCGCCGCCGCCAGCGCGGGGTGTGTGTCCTCAGTGGGAGCGGTTCGGTCGCCAACGTCACTCTCCGGCAACCGGCAGCGCCGGGAGCGGTCGTGGCACTGCATGGAAGGTTTGAGATTCTATCCCTGACCGGAGCGTTTCTGCCTGGCCCTGCTCCGCCAGGTGCCACCGGACTCACTGTGTATCTGGCCGGAGGACAGGGCCAGGTTGTAGGAGGGAGCGTTGTTGGTCCTCTCGTGGCGGCTGGACCAGTGATGATCATAGCAGCCACTTTTGCTAATGCTACATATGAGAGGTTGCCGCTTGAAGAGGAGGAGGAAGACGGTGGCGGTGGCAGTGTCCAGGGCGGAAGTACTCTGGGAGGGTCTCCTCCTGGAATTGGTAGCAGTGGCGGTGGTGGCGGCGGCGACGGTGTGAGTGGTGGGAGCCACTTGCCCGGTGGGATTCCCGATCCTTCTTCTTTGCCTTTGTATAACCTGCCACCAAATCTTCTATCCAATGGAGGAGGCCAAGTGGGGCATGAGGCTTTCGCTTGGGCACATGGCCATGGAAGACCACCTTTCTGA 822 0.601 MDLSINERSFGREREEEEEEDRDNGDEPKEGAVEVGTRRPRGRPPGSKNKPKPPIFVTRDSPNSLRSHVMEVAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGAFLPGPAPPGATGLTVYLAGGQGQVVGGSVVGPLVAAGPVMIIAATFANATYERLPLEEEEEDGGGGSVQGGSTLGGSPPGIGSSGGGGGGDGVSGGSHLPGGIPDPSSLPLYNLPPNLLSNGGGQVGHEAFAWAHGHGRPPF 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00134 273 MobiDBLite consensus disorder prediction 1 63 - -
Viun7g00134 273 MobiDBLite consensus disorder prediction 1 15 - -
Viun7g00134 273 MobiDBLite consensus disorder prediction 188 239 - -
Viun7g00134 273 SUPERFAMILY AF0104/ALDC/Ptd012-like 62 191 - -
Viun7g00134 273 FunFam AT-hook motif nuclear-localized protein 65 192 - -
Viun7g00134 273 PIRSF ESCAROLA 3 273 IPR014476 GO:0003680
Viun7g00134 273 Gene3D - 65 193 - -
Viun7g00134 273 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 16 266 IPR014476 GO:0003680
Viun7g00134 273 ProSiteProfiles PPC domain profile profile. 62 201 IPR005175 -
Viun7g00134 273 Pfam Plants and Prokaryotes Conserved (PCC) domain 66 178 IPR005175 -
Viun7g00134 273 CDD DUF296 66 149 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00134 Viun-Chr7 857610 859350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00134 28 273 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 67.339 3.32e-101 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00134 - - gmx:102663643 334.339