Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00119 ATGGAAGAAGAGGGTTCAAAGGGAAAAGCCATGGATGAAGAAGAGCATGTAAAGTACAGAGGAGTACGTAGAAGGCCATGGGGAAAATATGCAGCAGAGATTCGTGACTCAATGAGACATGGTCAAAGGTTGTGGCTGGGAACATTCCCCACAGCAGAGGAAGCTGCTAGAGCCTATGACAGAGCTGCATATGCCATGAGAGGTCCCTTTGCAGTCCTAAATTTTCCTGATGAATACCCTCCTTCACCGGCATCTGCTTCTTCCTCTTCGTCTTCCTCTTCGTCTGTGTCCTTTTCAGGTTATGGACACGTGGAAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAATGAAGAAGGAAGTCAAGTATTTGAGTTTGAGTACTTTGATGACAAATTGTTGGAGGAGCTTCTTGGTTATGATGAAGACAAAAATAAGCATGGCAAGTGA 447 0.4519 MEEEGSKGKAMDEEEHVKYRGVRRRPWGKYAAEIRDSMRHGQRLWLGTFPTAEEAARAYDRAAYAMRGPFAVLNFPDEYPPSPASASSSSSSSSSVSFSGYGHVEGRGRGRGRGRNEEGSQVFEFEYFDDKLLEELLGYDEDKNKHGK 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00119 148 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
Viun7g00119 148 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Viun7g00119 148 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Viun7g00119 148 MobiDBLite consensus disorder prediction 81 100 - -
Viun7g00119 148 CDD AP2 18 77 IPR001471 GO:0003700|GO:0006355
Viun7g00119 148 Pfam AP2 domain 18 68 IPR001471 GO:0003700|GO:0006355
Viun7g00119 148 SMART rav1_2 18 82 IPR001471 GO:0003700|GO:0006355
Viun7g00119 148 SUPERFAMILY DNA-binding domain 18 78 IPR016177 GO:0003677
Viun7g00119 148 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
Viun7g00119 148 FunFam Ethylene-responsive transcription factor 2 18 77 - -
Viun7g00119 148 PANTHER DNA-BINDING DOMAIN 13 142 IPR044808 GO:0003700|GO:0009873
Viun7g00119 148 MobiDBLite consensus disorder prediction 75 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00119 Viun-Chr7 776474 777153 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00119 13 143 AP2-EREBP Transcription Factor Family AT3G23230 50.382 2.75e-37 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Viun7g00119 AP2 2e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00119 - - gmx:100775830 174.096