Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00118 ATGGATAACCAAAGCCAAGCATATTCCATGGAGAAAATCCAAAGGGAAGAGCATGAGAAGTTGAAGGAGACAAAAGTCCGGTACCGCGGCGTCCGACGGCGGCCGTGGGGGAAGTATGCGGCGGAGATCAGAGACCCTTCTAAGCAAGGGTCAAGGTTGTGGTTAGGAACCTTTGAGAGTGCTGAAGAAGCAGCTAGGGCATACGATCATGCAGCTTTTACCATGAGGGGTCATGTTGCAATTTTGAATTTTCCTAATGAGTACCGTTCTCATGTTAGGGTTTATCCTCAAAATTTACCATCATCGTCGTCGTCATCATCTGTTGCTCATGCAAATGGTGAACAACAAAGACAGGTTTTTGAGTTTGAGTATTTGGATGATAAGGTGTTGGAGGAGCTTCTTGAGTTTGAAGAAAAAAAATAA 423 0.4468 MDNQSQAYSMEKIQREEHEKLKETKVRYRGVRRRPWGKYAAEIRDPSKQGSRLWLGTFESAEEAARAYDHAAFTMRGHVAILNFPNEYRSHVRVYPQNLPSSSSSSSVAHANGEQQRQVFEFEYLDDKVLEELLEFEEKK 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00118 140 MobiDBLite consensus disorder prediction 1 21 - -
Viun7g00118 140 SMART rav1_2 27 91 IPR001471 GO:0003700|GO:0006355
Viun7g00118 140 Gene3D AP2/ERF domain 26 87 IPR036955 GO:0003700|GO:0006355
Viun7g00118 140 SUPERFAMILY DNA-binding domain 27 86 IPR016177 GO:0003677
Viun7g00118 140 PANTHER DNA-BINDING DOMAIN 15 135 IPR044808 GO:0003700|GO:0009873
Viun7g00118 140 FunFam Ethylene-responsive transcription factor 2 26 86 - -
Viun7g00118 140 Pfam AP2 domain 27 78 IPR001471 GO:0003700|GO:0006355
Viun7g00118 140 PRINTS Ethylene responsive element binding protein signature 28 39 IPR001471 GO:0003700|GO:0006355
Viun7g00118 140 PRINTS Ethylene responsive element binding protein signature 51 67 IPR001471 GO:0003700|GO:0006355
Viun7g00118 140 ProSiteProfiles AP2/ERF domain profile. 27 85 IPR001471 GO:0003700|GO:0006355
Viun7g00118 140 CDD AP2 27 86 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00118 Viun-Chr7 756727 757149 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00118 23 140 AP2-EREBP Transcription Factor Family AT3G23230 62.903 7.68e-50 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Viun7g00118 AP2 2.5e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00118 - - vun:114189870 193.356