Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00071 ATGGGAATAAGAGACTTCCATATCAAGCTTAAGGCATTCAGGTTGAAACGTTTTTTCTTTGGAAGAAGGAGAAACAAATGGAGAGGAAACAAGCCTTCATGGATGATTCCAATATCACATGGACATCATGTGGTGGAGCATCATGTGATCAAAGGTGGTTCTGATGACTCAGAGTTTGATTCAGTTGTGATACAGAGGGAGCAGATGGATCACACAGAACTGTGGTATTTTGGAATCTTTGATGCTGTAGTTGGAGATGGAGTTACCAAGTATGTGCAATCCCATTTCTTTGGCAAGAAGCTCAAAGAGTGTCATATGAGGAGAAAAGGCAAAGAAACACTGAAGAGAGCTTACCTAGGTGTGAGAACAAAGATCAGAGAGGCACTGAAGCCAGAGGAGGAGATATGCAGAATAGGTTCAACATCAGTGATGGTGATAAATGGAGAAAAGCTTGTGATAGCCAACATGGGAGATTACAGAACTGTTTTGTGCAGAAATGGTGTCGCTTATCAGACAACTGGCAGATACAGTCCTTCAGCCAAGAGAAATTGGTATAGCAGACTCTTTTCAGTACGCATGATAGCTTGTGAATCAGGCAACACAACAGATACAAAGCATTCTAAAGGGTCAGAACTTGTGGTGGGAGGTGATAGAATCGATTCTGATACTGAATTTTTGATCCTAGCAAGCAATGGTATATGGGAGGTGATGAAGAACCAAGAGGCTGTGAATCTGATAAGACACATAGAGGATCCACAAGAAGCAGCTGAGTGCTTGGCAAAGGAAGCTTTGATCAGAATGAGCAGAAGCAAAATTTCATGCTTAGTCATTCGCTTTGACTGA 843 0.4187 MGIRDFHIKLKAFRLKRFFFGRRRNKWRGNKPSWMIPISHGHHVVEHHVIKGGSDDSEFDSVVIQREQMDHTELWYFGIFDAVVGDGVTKYVQSHFFGKKLKECHMRRKGKETLKRAYLGVRTKIREALKPEEEICRIGSTSVMVINGEKLVIANMGDYRTVLCRNGVAYQTTGRYSPSAKRNWYSRLFSVRMIACESGNTTDTKHSKGSELVVGGDRIDSDTEFLILASNGIWEVMKNQEAVNLIRHIEDPQEAAECLAKEALIRMSRSKISCLVIRFD 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00071 280 Gene3D - 210 280 IPR036457 -
Viun7g00071 280 SMART PP2C_4 32 277 IPR001932 -
Viun7g00071 280 SUPERFAMILY PP2C-like 58 280 IPR036457 -
Viun7g00071 280 Gene3D - 40 188 IPR036457 -
Viun7g00071 280 CDD PP2Cc 60 279 IPR001932 -
Viun7g00071 280 Pfam Protein phosphatase 2C 218 270 IPR001932 -
Viun7g00071 280 Pfam Protein phosphatase 2C 73 175 IPR001932 -
Viun7g00071 280 ProSiteProfiles PPM-type phosphatase domain profile. 56 279 IPR001932 -
Viun7g00071 280 PANTHER PROTEIN PHOSPHATASE 60 279 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00071 Viun-Chr7 393433 396259 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00071 1 279 PP2C-type Phosphatase Gene Family AT3G23360 46.809 5.03e-80 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00071 K19704 - gmx:100794054 494.967