Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00059 ATGGGGAGAACAGGCAAATGGCTCAGAAACTTGTTGACAGGGAAGAGAGACAGAGAAAAAGAGAAGGAAAAATGTGGTACCAACAACCTCTGTCTGTTAAATGCCACAACACAGAATCCAACAACTCCTGCTTCTTCAACAACAACAACAACAACAACATCATCAAACACTCCGAAGGAGAAAAGAAGGTGGAGTTTCAGGAGATCATCAGCTTCCAGGGAACTGAATCTTGCAGAATCTGGTGTCACTGCCTCAGTGACAGTGCAAACTACCACCACAGATGCTGAGAATGATCGAATGAAACATGTTACTGTGGTGCCTGCTGATGCTGCTATCATCTGCTTCACTCCTGATTCCAATATATCGTCAACAAGTATTGAAGAGGCTGCAGCCATTAAAATTCAGTCAGTTTTTCGGTCCTACTTGGCAAGAAAGGCTCTGTGTGCTCTTAGAGGACTAGTGAAGTTGCAGGCACTAGTGAGGGGTCATTTGGTGAGAAAACAGGCCAGGGAGACACTAAGATGCATGCAGGCTTTGGTCATAGCACAAGCCAGGGCTCGTGCTCAGAGGGCAAGGATCGTGTCAGAAGGAAAAACTGATCAAAATCTTTCACCCTACAGAATAACCCCAGAGGACAACTTCTTCATGAACATGTATAATGAAATGGAAAGTGGTTTGGAATTGGAAGAGAATGCCAAGATTGTTGAGATGGCTGTTTGTGAATCCAAAGCTAACTCCAGAGGCAGAAACAGCTCTGCAAATAGAGAACTTTCTGATCACAGATTTTCTGCATATTATTCATCAAACGGTTCATACAAGGAGGAAAACTACAATGCATCATCACCTGCACCATCAACACTGACAGAATTGAGTCCAAGAGCATACAGTGGTCATTTTGAGGAGTGTTCCTTCAGCACAGCACAAAGCAGTCCCTATTACAACAACACAAAGCTACCCTTTACCTTCCCTAAACCACCCTACACAGAGGCCATGTCCTATGACCACCCTTTGTTTCCAAACTACATGGCCAACACAGAATCATCAAGGGCCAAAGCCAGATCACAGAGTGCACCAAAGGCAAGGCCAGATTCTGTTGAGAGGCAACCAAGCAGAAGAAGGGCTTCAATGGAAGGTAGAAATGTGCCAAAGCCAGTTAGGATGCAGAGGTCATCTTCTCATGTTGGTATCACTGCTCAAAACTACCAATATCCTTGGTCAATAAAGCTTGACAGGTCCATAGTCAGTGAGTGTGGCTCTACAAGCACAGTGCTCACAAACTCTAATTACTACTGCACATGA 1299 0.4457 MGRTGKWLRNLLTGKRDREKEKEKCGTNNLCLLNATTQNPTTPASSTTTTTTTSSNTPKEKRRWSFRRSSASRELNLAESGVTASVTVQTTTTDAENDRMKHVTVVPADAAIICFTPDSNISSTSIEEAAAIKIQSVFRSYLARKALCALRGLVKLQALVRGHLVRKQARETLRCMQALVIAQARARAQRARIVSEGKTDQNLSPYRITPEDNFFMNMYNEMESGLELEENAKIVEMAVCESKANSRGRNSSANRELSDHRFSAYYSSNGSYKEENYNASSPAPSTLTELSPRAYSGHFEECSFSTAQSSPYYNNTKLPFTFPKPPYTEAMSYDHPLFPNYMANTESSRAKARSQSAPKARPDSVERQPSRRRASMEGRNVPKPVRMQRSSSHVGITAQNYQYPWSIKLDRSIVSECGSTSTVLTNSNYYCT 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00059 432 Pfam IQ calmodulin-binding motif 154 170 IPR000048 GO:0005515
Viun7g00059 432 Pfam IQ calmodulin-binding motif 129 147 IPR000048 GO:0005515
Viun7g00059 432 SMART iq_5 126 148 IPR000048 GO:0005515
Viun7g00059 432 SMART iq_5 149 170 IPR000048 GO:0005515
Viun7g00059 432 Gene3D - 126 178 - -
Viun7g00059 432 MobiDBLite consensus disorder prediction 1 68 - -
Viun7g00059 432 MobiDBLite consensus disorder prediction 29 59 - -
Viun7g00059 432 MobiDBLite consensus disorder prediction 345 393 - -
Viun7g00059 432 ProSiteProfiles IQ motif profile. 151 178 IPR000048 GO:0005515
Viun7g00059 432 PANTHER IQ-DOMAIN 5-RELATED 1 378 - -
Viun7g00059 432 ProSiteProfiles IQ motif profile. 127 155 IPR000048 GO:0005515
Viun7g00059 432 MobiDBLite consensus disorder prediction 10 26 - -
Viun7g00059 432 MobiDBLite consensus disorder prediction 364 379 - -
Viun7g00059 432 Pfam Protein of unknown function (DUF4005) 309 379 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00059 Viun-Chr7 344577 347065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00059 1 429 IQD Protein Family AT4G14750 45.415 8.36e-97 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00059 - - pvu:PHAVU_007G277500g 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g00059 7 344577 347065 Viun7g00059 7 344577 347065 ECH