Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00015 ATGTTTGGTAGCACAACCAGCGTCGGTAATTGGTGTACAAGAGTAGCACCATCTTTGTTTTCCCCATTCTATCTTCCTAATCTTAATCCTAATCCACTTTGTTTATTGTCCACGCTCATCACTCCAAATCCAACAACGCTCTCGCTTCCGCTCACTGCAAGACGGTTTTCGTTTTCACCAGTTTCACCAATGGACGACGAACACCAAGCCACGGAGCAAGAATACGCCTTTCACTCCGACCTGCTCCACCAATTCACCGCCATCCCCTCCGTCGACAAGGCATGGCTTTTCAACTCCCACACCGGCTTGGCTTCGCAGGCAATGTTCTGCGTTAGTCAACCCAACCTTTTGACCAACAAGAGGAAGAAGTCCATCGTCTCCGCTTCCCTGCTCAGACAAAGCGACGCCACCGTTGCGTTCCACTGGGCTCCCTTTCCGATCGAATTGACCGGAGTCTCCGCCATGGTTCCGTCGCCTTCTGCCTCCAAGCTGCTTATTGTTCGGAATCCCGAGAGTGAAGGTCCTTGCCGCTTTGAAATTTGGAGCTCCTCTCAACTGGAAAAGGAGTTCCATGTCCCTCAATCAAAGCATGGTTCTGTGTACATTGATGGATGGTTTGAGGGGATCTCTTGGAATTTGAATGAAACTTGTATAGCGTATGTAGCTGAAGAGCCAGCTCCTGCAAAGCCCACATTCAATGATTTGGGTGGCTACCAGAAAGGTAGTTCTTCAGACAAGGATGGTGGTACCTGGAAAGCTCAAGGAGAATGGGAGGAAGAGTGGGGAGAGACGTATGCAGGGAAGAGGCAGCCTGCCCTTTTTGTCATCGACATCACTAGTGGAGAGGTACAGGCCGTCAAAGGAATTGACAAGTCTTTGAGTGTTGGACAAGTTGTGTGGGCTCCAGCAGTTGAAGGCTCTGTGCAATATTTGGTCTTTGTTGGATGGTCATTTGAGACAAGAAAACTTGGTATTAAGTACTGCTATAACAGGCCATGTGCATTATATGCTGTTAAAGCACCATACCATGAGTCAAAAGCAAATGAAACTGAGACTGACTCAACAGAAGATGTTCAGGCTGTTAACCTAACTCAAACCATAAGTAGTGCTTTCTTTCCACGGTTCAGCCCAGATGGAAAGTTTCTTGTATTTGTATCTGCAAGAAGCTCAGTTGATTCTGGCGCCCATTCTGCTACAGATTCACTTCATAGAATTGATTGGCCTAAGGATATGAAGCTTTATCAATCTTCTAAAATTCATGAAGTGATTCCAGTTGTGTTGTTTGCGGAGGATGGAAGCTTCCCAGGGCTTTACTGTTCAAATATCCTCAGCGATCCATGGCTTTCCGATGGCCACACTTTAGTTATAGCTTCTGTATGGCACAGCAATCAAGTTTTACTTTCCATCAATGTACTGAGTGGAGAAATATTGCGAATCACCCCTGCTAACTCAAATTTCTCTTGGAGTCTTCTTACATTGGATGGGAACAATATTCTTGCTGTTTCTAGCAGTCCAGTAGACGTTCCTCAAATAAAGTACGGAGCTATTGTTAAAAATACAACTAATGATAAAGAATGGAGTTGGTCAGATGTCTCAAATCCCATATTGAAGTGCTCGGACAAGGTTAGGTCCTCTATCTCGTCTCTGACATCCAGTATAATGAAGATCTCAGTCAAGGATGCTTCTGAAAGCTTAACAAAAGGTGCTAGTCAACCTTATGAAGCTATATTTGTGTCATCACAAACTAAGAAAAGTGATGCATGTGATCCACTAATTGTGGTCCTTCATGGGGGACCCCATTCTGTCTTATTGTCAAGATTTTCAAGGCCATTGGCTTATCTTTCTTCGGTTGGATATAGCTTGTTAATTGTTAATTACAGAGGCTCAATAGGATTTGGCGAGGAAGCCTTGCAATCTCTTCCAGGAAAAGTTGGCTCTCAGGATGTCAACGATGTGCTCACTGCTATTGATCATGTCATTGACTTGGGACTCGCCAGTCCTTCAAAGATTGCAGTTCTTGGTGGCTCACATGGTGGCTTTCTGACAACCCACTTGATTGGCCAGGCACCTGAGAAATTTGTTGCAGCCGCTGCTAGGAATCCTGTGTGTAACCTTGCACTGATGGTTGGTACAACTGATATCCCTGATTGGTGCTATGTGGAGACTTATGGAACCAAGGGTAGAGACAAGTTTACTGAAGCACCTTCAGCAGCGGATCTAACTCTATTTTATAGCAAATCTCCTATTTCACACCTCTCAAAGGCAAAAACACCAACGCTTTTTCTACTTGGTGCTCAAGATCTCCGTGTTCCAATTTCGACTGGACTACAATATGCTCGGGCTTTAAGGGAGAAAGGAGTACCAACAAAAGTCATCGTGTTTCCAAATGATGTTCATGGAATTGAAAGACCACAATCTGACTTTGAAAGCTACCTTAACATTGCGATCTGGTTCAACAAGTATTGCAAATGA 2472 0.4466 MFGSTTSVGNWCTRVAPSLFSPFYLPNLNPNPLCLLSTLITPNPTTLSLPLTARRFSFSPVSPMDDEHQATEQEYAFHSDLLHQFTAIPSVDKAWLFNSHTGLASQAMFCVSQPNLLTNKRKKSIVSASLLRQSDATVAFHWAPFPIELTGVSAMVPSPSASKLLIVRNPESEGPCRFEIWSSSQLEKEFHVPQSKHGSVYIDGWFEGISWNLNETCIAYVAEEPAPAKPTFNDLGGYQKGSSSDKDGGTWKAQGEWEEEWGETYAGKRQPALFVIDITSGEVQAVKGIDKSLSVGQVVWAPAVEGSVQYLVFVGWSFETRKLGIKYCYNRPCALYAVKAPYHESKANETETDSTEDVQAVNLTQTISSAFFPRFSPDGKFLVFVSARSSVDSGAHSATDSLHRIDWPKDMKLYQSSKIHEVIPVVLFAEDGSFPGLYCSNILSDPWLSDGHTLVIASVWHSNQVLLSINVLSGEILRITPANSNFSWSLLTLDGNNILAVSSSPVDVPQIKYGAIVKNTTNDKEWSWSDVSNPILKCSDKVRSSISSLTSSIMKISVKDASESLTKGASQPYEAIFVSSQTKKSDACDPLIVVLHGGPHSVLLSRFSRPLAYLSSVGYSLLIVNYRGSIGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDLGLASPSKIAVLGGSHGGFLTTHLIGQAPEKFVAAAARNPVCNLALMVGTTDIPDWCYVETYGTKGRDKFTEAPSAADLTLFYSKSPISHLSKAKTPTLFLLGAQDLRVPISTGLQYARALREKGVPTKVIVFPNDVHGIERPQSDFESYLNIAIWFNKYCK 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00015 823 Gene3D alpha/beta hydrolase 568 821 IPR029058 -
Viun7g00015 823 FunFam Acylamino-acid-releasing enzyme 562 822 - -
Viun7g00015 823 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 71 344 IPR045550 -
Viun7g00015 823 Gene3D - 342 567 IPR011042 -
Viun7g00015 823 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 68 822 - -
Viun7g00015 823 SUPERFAMILY alpha/beta-Hydrolases 587 822 IPR029058 -
Viun7g00015 823 Pfam WD40-like Beta Propeller Repeat 370 393 IPR011659 -
Viun7g00015 823 ProSitePatterns Prolyl endopeptidase family serine active site. 651 681 IPR002471 GO:0004252|GO:0006508
Viun7g00015 823 Pfam Prolyl oligopeptidase family 607 822 IPR001375 GO:0006508|GO:0008236
Viun7g00015 823 SUPERFAMILY DPP6 N-terminal domain-like 150 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00015 Viun-Chr7 129608 140287 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00015 590 806 Carbohydrate Esterase AT5G36210 25.806 1.02e-17 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00015 K01303 - gmx:100803600 1380.54