LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun7g00015	ATGTTTGGTAGCACAACCAGCGTCGGTAATTGGTGTACAAGAGTAGCACCATCTTTGTTTTCCCCATTCTATCTTCCTAATCTTAATCCTAATCCACTTTGTTTATTGTCCACGCTCATCACTCCAAATCCAACAACGCTCTCGCTTCCGCTCACTGCAAGACGGTTTTCGTTTTCACCAGTTTCACCAATGGACGACGAACACCAAGCCACGGAGCAAGAATACGCCTTTCACTCCGACCTGCTCCACCAATTCACCGCCATCCCCTCCGTCGACAAGGCATGGCTTTTCAACTCCCACACCGGCTTGGCTTCGCAGGCAATGTTCTGCGTTAGTCAACCCAACCTTTTGACCAACAAGAGGAAGAAGTCCATCGTCTCCGCTTCCCTGCTCAGACAAAGCGACGCCACCGTTGCGTTCCACTGGGCTCCCTTTCCGATCGAATTGACCGGAGTCTCCGCCATGGTTCCGTCGCCTTCTGCCTCCAAGCTGCTTATTGTTCGGAATCCCGAGAGTGAAGGTCCTTGCCGCTTTGAAATTTGGAGCTCCTCTCAACTGGAAAAGGAGTTCCATGTCCCTCAATCAAAGCATGGTTCTGTGTACATTGATGGATGGTTTGAGGGGATCTCTTGGAATTTGAATGAAACTTGTATAGCGTATGTAGCTGAAGAGCCAGCTCCTGCAAAGCCCACATTCAATGATTTGGGTGGCTACCAGAAAGGTAGTTCTTCAGACAAGGATGGTGGTACCTGGAAAGCTCAAGGAGAATGGGAGGAAGAGTGGGGAGAGACGTATGCAGGGAAGAGGCAGCCTGCCCTTTTTGTCATCGACATCACTAGTGGAGAGGTACAGGCCGTCAAAGGAATTGACAAGTCTTTGAGTGTTGGACAAGTTGTGTGGGCTCCAGCAGTTGAAGGCTCTGTGCAATATTTGGTCTTTGTTGGATGGTCATTTGAGACAAGAAAACTTGGTATTAAGTACTGCTATAACAGGCCATGTGCATTATATGCTGTTAAAGCACCATACCATGAGTCAAAAGCAAATGAAACTGAGACTGACTCAACAGAAGATGTTCAGGCTGTTAACCTAACTCAAACCATAAGTAGTGCTTTCTTTCCACGGTTCAGCCCAGATGGAAAGTTTCTTGTATTTGTATCTGCAAGAAGCTCAGTTGATTCTGGCGCCCATTCTGCTACAGATTCACTTCATAGAATTGATTGGCCTAAGGATATGAAGCTTTATCAATCTTCTAAAATTCATGAAGTGATTCCAGTTGTGTTGTTTGCGGAGGATGGAAGCTTCCCAGGGCTTTACTGTTCAAATATCCTCAGCGATCCATGGCTTTCCGATGGCCACACTTTAGTTATAGCTTCTGTATGGCACAGCAATCAAGTTTTACTTTCCATCAATGTACTGAGTGGAGAAATATTGCGAATCACCCCTGCTAACTCAAATTTCTCTTGGAGTCTTCTTACATTGGATGGGAACAATATTCTTGCTGTTTCTAGCAGTCCAGTAGACGTTCCTCAAATAAAGTACGGAGCTATTGTTAAAAATACAACTAATGATAAAGAATGGAGTTGGTCAGATGTCTCAAATCCCATATTGAAGTGCTCGGACAAGGTTAGGTCCTCTATCTCGTCTCTGACATCCAGTATAATGAAGATCTCAGTCAAGGATGCTTCTGAAAGCTTAACAAAAGGTGCTAGTCAACCTTATGAAGCTATATTTGTGTCATCACAAACTAAGAAAAGTGATGCATGTGATCCACTAATTGTGGTCCTTCATGGGGGACCCCATTCTGTCTTATTGTCAAGATTTTCAAGGCCATTGGCTTATCTTTCTTCGGTTGGATATAGCTTGTTAATTGTTAATTACAGAGGCTCAATAGGATTTGGCGAGGAAGCCTTGCAATCTCTTCCAGGAAAAGTTGGCTCTCAGGATGTCAACGATGTGCTCACTGCTATTGATCATGTCATTGACTTGGGACTCGCCAGTCCTTCAAAGATTGCAGTTCTTGGTGGCTCACATGGTGGCTTTCTGACAACCCACTTGATTGGCCAGGCACCTGAGAAATTTGTTGCAGCCGCTGCTAGGAATCCTGTGTGTAACCTTGCACTGATGGTTGGTACAACTGATATCCCTGATTGGTGCTATGTGGAGACTTATGGAACCAAGGGTAGAGACAAGTTTACTGAAGCACCTTCAGCAGCGGATCTAACTCTATTTTATAGCAAATCTCCTATTTCACACCTCTCAAAGGCAAAAACACCAACGCTTTTTCTACTTGGTGCTCAAGATCTCCGTGTTCCAATTTCGACTGGACTACAATATGCTCGGGCTTTAAGGGAGAAAGGAGTACCAACAAAAGTCATCGTGTTTCCAAATGATGTTCATGGAATTGAAAGACCACAATCTGACTTTGAAAGCTACCTTAACATTGCGATCTGGTTCAACAAGTATTGCAAATGA	2472	0.4466	MFGSTTSVGNWCTRVAPSLFSPFYLPNLNPNPLCLLSTLITPNPTTLSLPLTARRFSFSPVSPMDDEHQATEQEYAFHSDLLHQFTAIPSVDKAWLFNSHTGLASQAMFCVSQPNLLTNKRKKSIVSASLLRQSDATVAFHWAPFPIELTGVSAMVPSPSASKLLIVRNPESEGPCRFEIWSSSQLEKEFHVPQSKHGSVYIDGWFEGISWNLNETCIAYVAEEPAPAKPTFNDLGGYQKGSSSDKDGGTWKAQGEWEEEWGETYAGKRQPALFVIDITSGEVQAVKGIDKSLSVGQVVWAPAVEGSVQYLVFVGWSFETRKLGIKYCYNRPCALYAVKAPYHESKANETETDSTEDVQAVNLTQTISSAFFPRFSPDGKFLVFVSARSSVDSGAHSATDSLHRIDWPKDMKLYQSSKIHEVIPVVLFAEDGSFPGLYCSNILSDPWLSDGHTLVIASVWHSNQVLLSINVLSGEILRITPANSNFSWSLLTLDGNNILAVSSSPVDVPQIKYGAIVKNTTNDKEWSWSDVSNPILKCSDKVRSSISSLTSSIMKISVKDASESLTKGASQPYEAIFVSSQTKKSDACDPLIVVLHGGPHSVLLSRFSRPLAYLSSVGYSLLIVNYRGSIGFGEEALQSLPGKVGSQDVNDVLTAIDHVIDLGLASPSKIAVLGGSHGGFLTTHLIGQAPEKFVAAAARNPVCNLALMVGTTDIPDWCYVETYGTKGRDKFTEAPSAADLTLFYSKSPISHLSKAKTPTLFLLGAQDLRVPISTGLQYARALREKGVPTKVIVFPNDVHGIERPQSDFESYLNIAIWFNKYCK	823

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun7g00015	823	Gene3D	alpha/beta hydrolase	568	821	IPR029058	-
	Viun7g00015	823	FunFam	Acylamino-acid-releasing enzyme	562	822	-	-
	Viun7g00015	823	Pfam	Acylamino-acid-releasing enzyme, N-terminal domain	71	344	IPR045550	-
	Viun7g00015	823	Gene3D	-	342	567	IPR011042	-
	Viun7g00015	823	PANTHER	SERINE PEPTIDASE S9 FAMILY MEMBER	68	822	-	-
	Viun7g00015	823	SUPERFAMILY	alpha/beta-Hydrolases	587	822	IPR029058	-
	Viun7g00015	823	Pfam	WD40-like Beta Propeller Repeat	370	393	IPR011659	-
	Viun7g00015	823	ProSitePatterns	Prolyl endopeptidase family serine active site.	651	681	IPR002471	GO:0004252\|GO:0006508
	Viun7g00015	823	Pfam	Prolyl oligopeptidase family	607	822	IPR001375	GO:0006508\|GO:0008236
	Viun7g00015	823	SUPERFAMILY	DPP6 N-terminal domain-like	150	509	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun7g00015	Viun-Chr7	129608	140287	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Viun7g00015	590	806	Carbohydrate Esterase	AT5G36210	25.806	1.02e-17	86.3

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun7g00015	K01303		-	gmx:100803600	1380.54

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