Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00006 ATGGATTCATTTTTTCCCGAGAAACTTCTGGGTGAGATTTTCTGGGATCAACCCCTTTTGCCCACTGATCAAAGCGATGTAATTCAAAATTCCCATATGATCAAGGCTGAAGCTTTCCCTCCAGCAACTCAAAGTGCTTTTGTTCAATATATAGACCTACCCAGAAGAAATAACCCTCTAAACGGGTCAAATTCAGAGAGCATGAGTAAGAGGATGCTTGCTTTCTTGAGAAAAAGTTCCCCTGTGGAGAGAAATAACGTAGAAGAGAATGAAAGAGATCGCAGTTTCAGGCACATGATCAACGAGAGAATGAGAAGACAGAGACAGAGACAATGTTGCTTGGCCCTGCATTCAATTTTACCACATGGAACCAAAACGGATAATAATTCTGTGATTCAAACAGCAGCAAAGGAAATTGTAAGGCTACAAGGATGCAGAGAAGAGCTGAAGAGGAAAAATTGCGAGGCTGAAGCAAATGCTGAAGGTGTTTGTGTGAGGAACGAAGATGGAGGAAGCAAGATTGCATATTTGAGAGTTGCAGATCCGGAGTGTGGAATTGATTCAATGGTTGAGAGGCTGAAGTGGTTGAAAGAGGAAGGAGTGGAGAGCAGGAGGATCAAATCAAGTTTCTCCCCAACGGAGTTGTTTGCAGTGTTAGAGATAGAGTGGTGA 672 0.4271 MDSFFPEKLLGEIFWDQPLLPTDQSDVIQNSHMIKAEAFPPATQSAFVQYIDLPRRNNPLNGSNSESMSKRMLAFLRKSSPVERNNVEENERDRSFRHMINERMRRQRQRQCCLALHSILPHGTKTDNNSVIQTAAKEIVRLQGCREELKRKNCEAEANAEGVCVRNEDGGSKIAYLRVADPECGIDSMVERLKWLKEEGVESRRIKSSFSPTELFAVLEIEW 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00006 223 Coils Coil 132 152 - -
Viun7g00006 223 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 93 142 IPR011598 GO:0046983
Viun7g00006 223 Gene3D - 83 159 IPR036638 GO:0046983
Viun7g00006 223 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 90 155 IPR036638 GO:0046983
Viun7g00006 223 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 1 222 IPR044658 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00006 44 222 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43650 37.705 1.82e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00006 - - pvu:PHAVU_007G280700g 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g00006 7 75194 76264 Viun7g00006 7 75194 76264 ECH