Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00005 ATGGACACATCTCTGGTGTTTACGGTGCAGAGGCGGGAGCCAGAGCTGATAGCTCCGGCGAAGGCCACTCCTCGCGAAGTGAAGCTACTCTCAGACATAGATGACCAAGATGGGTTAAGGTTTCAGATTCCAGTGATACAGTTCTATAGATATGATCCAGCGCAGGCCGGTACAGACCCTGTTGCGGTTATCAGAGAGGCCTTGGCCAAAACGCTTGTGTTTTACTATCCCTTTGCAGGTAGGCTGAGGGAAGGAGCCGGTCGTAAACTCATGGTGGACTGCACAGGGGAGGGTGTTTTGTTCATTGAAGCTGATGCAGATGTCACACTCACTCAATTTGGCCACGCTCTTCAACCTCCTTTCCCCTGCTGGGAGAATCTTCTTTACGATGTTCCTTCCTCCCAAGGAGTTCTTCACACTCCCCTTCTCCTAATTCAGGTAACGCGCCTCAAGTGCGGGGGGTTCATATTCGCGCTCCGTCTGAACCACACCATGAGTGACGCAGCGGGTCTGGTCCAGTTCATGAACGCGGTGGGAGAGATAGCGCGCGGGAGGCAGGAGCCCTCGGTCCCACCGGTGTGGCGCAGAGAACTTCTGAACGCGCGGGACCCACCGCGAGTGACGTGCATCCACCGCGAGTACGACGTCGTTCCGGACACAAAAGGCACGATCATCCCGGTGGACGACATGGCCCACCGCTCCTTCTTTTTCGGGCGCAGCGAACTCTCGGCCATCCGGCGCCTCCTCCCCCCTCACCAGAACCAGTGCTCCAGCTTCGATGTCCTGACCGCGTGCCTCTGGCGGTGCCGCACCCTGGCCCTGCAACCCGACAGTGACGAGGAGGTCCGCATTATCTGCATCGTGAACGCGCGCTCCAAATTCAACCCTCCTCTACCAGAAGGTTACTACGGCAACGTTTTTGCTTTCTCCGTGGCGGTTACGACTGCGGGAAAGTTATGCGAGAATCCTTTGGGGTATGCTTTGGAGTTGGTGAGGAAGGCGAAGGCGGATGTGAGCGAGGAGTACATGCAGTCGTTGGCAGATCTGATGGTTACTCGAGGACGGCCTCACTTCACGGTGGTGAGGTCGTATCTGGTGTCGGATGTGAGACGTGCGGGGTTCGAAGACGTTGACTTTGGGTGGGGTAAAGCTGTGTATGGAGGACCCGCCAAAGGAGGTGTTGGAGCCATTCCTGGTGTGGCTAGCTTTTACATACCCTTCAGAAATGATAAGGGCGAAGAAGGTTTGGTGATGCCCGTTTGCTTACCCTCTGAAGCCATGCAGAGGTTTGAGAAGGAGTTGGACTCTGTGCTCAACAATCGCCTTCCACCAACTATTAATACTCCTTCTTCAAATTCCAGGCACCTCCTTCTTTCTTCCTTGTAG 1386 0.5541 MDTSLVFTVQRREPELIAPAKATPREVKLLSDIDDQDGLRFQIPVIQFYRYDPAQAGTDPVAVIREALAKTLVFYYPFAGRLREGAGRKLMVDCTGEGVLFIEADADVTLTQFGHALQPPFPCWENLLYDVPSSQGVLHTPLLLIQVTRLKCGGFIFALRLNHTMSDAAGLVQFMNAVGEIARGRQEPSVPPVWRRELLNARDPPRVTCIHREYDVVPDTKGTIIPVDDMAHRSFFFGRSELSAIRRLLPPHQNQCSSFDVLTACLWRCRTLALQPDSDEEVRIICIVNARSKFNPPLPEGYYGNVFAFSVAVTTAGKLCENPLGYALELVRKAKADVSEEYMQSLADLMVTRGRPHFTVVRSYLVSDVRRAGFEDVDFGWGKAVYGGPAKGGVGAIPGVASFYIPFRNDKGEEGLVMPVCLPSEAMQRFEKELDSVLNNRLPPTINTPSSNSRHLLLSSL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00005 461 Gene3D - 220 434 IPR023213 -
Viun7g00005 461 PANTHER ACYL TRANSFERASE 4 7 437 - -
Viun7g00005 461 Pfam Transferase family 9 434 - -
Viun7g00005 461 Gene3D - 5 216 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00005 Viun-Chr7 63759 65671 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00005 9 434 Monolignol Biosynthesis Gene Families AT5G48930 31.757 3.61e-56 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00005 K19861 - gmx:100797017 781.556