Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g03266 ATGCAATGCATTTGCAATGAAAAAGCCATGGGAGACGACTCGCCAAAAAATAAAGTAAAGTTCCTCTGCAGCTACGCCGGCAAGGTCCTTCCACGACCCTCCGATGGGCTTCTGAGGTACGTGGGAGGCGAGACTCGGGTGGTTTCAGTGCCTCGTGACGTGACATTCGCCGAGCTGATGAAGAAGGTGGGGAACATGGTGGAGGGGGAGGTGGTGCTCAAGTACCAGCTTGTGCCCGAAGATCTGGACGCGTTGATTTCAGTTAGGACGGAGGAAGATGTGAAGCACATGATCCAGGAGCACGACCGCCACCAAACCGGATTGCTCCGTGCATTCCTGTTTCCGTCTTCAAAGATGCTTTTGGCTGCCTCGGAACCCTATCCATTGGAGCAACGTTACATCGACGCCGTGAATGGAATCCTCCGAACAAGCCCTAAAGCGACGACCAGGGGCTCTGCATGTTCTTCCCCGAAATCAATCTCACCCGAAGCAGGGGATCAGTACTCCCCTCGGTTTTGCAATAATTCGATTTCCATGTCGAGTGCGATGCAGAGAGTGCGAAGCTCTCCCAGCCTCTCAAACATGGATCAGCAAGCTCATTACCACCAGCCTCATCCCCATCACCCTTTTCTCAACTATCCATCTTTCTCTACGACTAGACCGCCCCAAGATCCTCAAATAGCAAGACTTGGTGGAAGGGGTGCCTCCTTCAACTACCATTACTCAAACCCTAGACAACCCCCCAGAGGAGTAGGAGGAGTAGGAGGCTATGGCTACCCTGATGACTCTGCAACTTATGGGAATCCCCTTCCTAATCTCCCCAGAAGTCCCAGAAGAAAATCTATATGGGAGTAG 855 0.524 MQCICNEKAMGDDSPKNKVKFLCSYAGKVLPRPSDGLLRYVGGETRVVSVPRDVTFAELMKKVGNMVEGEVVLKYQLVPEDLDALISVRTEEDVKHMIQEHDRHQTGLLRAFLFPSSKMLLAASEPYPLEQRYIDAVNGILRTSPKATTRGSACSSPKSISPEAGDQYSPRFCNNSISMSSAMQRVRSSPSLSNMDQQAHYHQPHPHHPFLNYPSFSTTRPPQDPQIARLGGRGASFNYHYSNPRQPPRGVGGVGGYGYPDDSATYGNPLPNLPRSPRRKSIWE 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g03266 284 SMART PB1_new 33 116 IPR000270 GO:0005515
Viun6g03266 284 SUPERFAMILY CAD & PB1 domains 34 118 - -
Viun6g03266 284 PANTHER OS05G0427100 PROTEIN-RELATED 12 226 - -
Viun6g03266 284 Gene3D - 39 115 - -
Viun6g03266 284 MobiDBLite consensus disorder prediction 219 284 - -
Viun6g03266 284 CDD PB1_UP2 22 114 - -
Viun6g03266 284 MobiDBLite consensus disorder prediction 146 167 - -
Viun6g03266 284 Pfam PB1 domain 38 115 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g03266 Viun-Chr6 34297125 34299197 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g03266 4 153 MAP Kinase Kinase Kinase AT3G46920 42.945 7.48e-35 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g03266 - - vun:114186951 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g03266 6 34297125 34299197 Viun6g03266 6 34297125 34299197 ECH