Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g03253 ATGGCTCTGATCCTGCACGCACCCAAAAGAAACAAAAATGTTTACAAGACTCTCATCGCAGCAGAGTACAGTGGTGTCCAACTGGAATTTGCCGATTTCGAAATGTCTGTTTCCAACAAATCTCCTGAGTTCCTCAAAATGAATCCTCTTGGGAAGACTCCTGTGTTGGAAACACCCGATGGTCCAGTCTTCGAGAGCAATGCTATTGCTCGTTACGTTGCTCGACTTAACGGTGACAACGCATTGTTCCTGTCTACTCCCATTGATAACGCCCGCATCGACCAGTGGATTGATTTTGCAACTTTGGAGATCGATACTAATATCCTCAAATGGTACATACCCAGACTTGGATTCGCTCCATACCTTCCACCAGTCGAGGAGGCTGCAAATTCTGCGTTGAAGAGAGCATTCGGTGCCTTGAACACTCACCTTGCATCCAATACGTATCTGGTTGGTCATTCCGTCACCCTTGCCGACATCATAATGACATGCAACCTGTATTTGGGTTTCACCCAGCTCTTAGTTAAGAGCTTCACCTCGGAGTTCCCTCATGTTGAGAGATACTTTTGGACCTTGGTCAACCAGCCCAATTTCCGCAAGATATTAGGCCAGATTAAGCAAACAGACGCCGTTCCACCTGTTCCATCTGCCAAGAAGCCTTCCCAGCCTAAGGAGTCGAAGCCCAAACCTAAGGATGAGCCGAAGAAAGTGGCTAAGCCAGAGCCAGAGAAGCCCAAGGAAGAGGCAGAGGAGGAGGCACCCAAGCCCAAGCCCAAAAATCCTCTTGATCTTCTTCCTCCAAGCAAGATGATATTGGATGAGTGGAAAAGACTCTATTCAAACACCAAGACCAACTTCCGCGAGGTTGCAATCAAAGGATTTTGGGACATGTATGATCCAGAGGGTTATTCTCTCTGGTTCTGTGATTACAAATACAACGACGAGAACACTGTTTCCTTTGTGACATTAAACAAGGTTGGTGGTTTTCTTCAGCGGATGGATCTGGCTCGCAAGTATGCTTTTGGAAAGATGCTTGTGATTGGATCACAGGCACCATTTAAGGTTAAGGGGTTGTGGCTTTTCCGCGGGCAAGAGATTCCGCAATTTGTGATTGACGAGTGCTATGATATGGAGCTGTACGAGTGGACCAAGGTTGACATCTCTGACGAAACTCAGAAAGAGCGGGTGAGTCAGATGATTGAGGATTATGAGCCATTTGAGGGAGAGCCTCTTCTGGATGCCAAGTGCTTCAAGTGA 1257 0.471 MALILHAPKRNKNVYKTLIAAEYSGVQLEFADFEMSVSNKSPEFLKMNPLGKTPVLETPDGPVFESNAIARYVARLNGDNALFLSTPIDNARIDQWIDFATLEIDTNILKWYIPRLGFAPYLPPVEEAANSALKRAFGALNTHLASNTYLVGHSVTLADIIMTCNLYLGFTQLLVKSFTSEFPHVERYFWTLVNQPNFRKILGQIKQTDAVPPVPSAKKPSQPKESKPKPKDEPKKVAKPEPEKPKEEAEEEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSQAPFKVKGLWLFRGQEIPQFVIDECYDMELYEWTKVDISDETQKERVSQMIEDYEPFEGEPLLDAKCFK 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g03253 418 SMART EF1G_2 257 365 IPR001662 GO:0003746|GO:0006414
Viun6g03253 418 FunFam Elongation factor 1-gamma 1 258 418 - -
Viun6g03253 418 CDD GST_C_EF1Bgamma_like 89 209 - -
Viun6g03253 418 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 214 IPR010987 -
Viun6g03253 418 Gene3D - 79 212 - -
Viun6g03253 418 Pfam Glutathione S-transferase, N-terminal domain 11 75 IPR004045 -
Viun6g03253 418 Gene3D Glutaredoxin 1 73 - -
Viun6g03253 418 MobiDBLite consensus disorder prediction 222 258 - -
Viun6g03253 418 SUPERFAMILY Thioredoxin-like 2 82 IPR036249 -
Viun6g03253 418 FunFam Elongation factor 1 gamma 79 214 - -
Viun6g03253 418 SFLD Main (cytGST) 5 189 - -
Viun6g03253 418 SUPERFAMILY GST C-terminal domain-like 72 209 IPR036282 -
Viun6g03253 418 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 258 418 IPR001662 GO:0003746|GO:0006414
Viun6g03253 418 MobiDBLite consensus disorder prediction 209 265 - -
Viun6g03253 418 FunFam Elongation factor 1B gamma 1 73 - -
Viun6g03253 418 CDD GST_N_EF1Bgamma 5 76 - -
Viun6g03253 418 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 418 IPR044628 GO:0004364
Viun6g03253 418 Pfam Glutathione S-transferase, C-terminal domain 125 196 IPR004046 -
Viun6g03253 418 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 81 IPR004045 -
Viun6g03253 418 SUPERFAMILY eEF1-gamma domain 258 418 IPR036433 GO:0003746|GO:0006414
Viun6g03253 418 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 258 418 IPR036433 GO:0003746|GO:0006414
Viun6g03253 418 Pfam Elongation factor 1 gamma, conserved domain 257 365 IPR001662 GO:0003746|GO:0006414
Viun6g03253 418 SFLD Glutathione Transferase (cytosolic) 5 189 IPR040079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g03253 Viun-Chr6 34244746 34247136 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g03253 1 418 Eukaryotic Initiation Factors Gene Family AT1G57720 75.179 0.0 627