Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g03244 ATGGCTCCCTCCATGGCTATATTTACACTTAACAGACGACTTCAGCAATCCACTCACTTGGAACACAAGAATCAGAATTGCATTGGGAACCGCTCGGGCTATCGTGTTAGTTTATATCTCCCATATAGTACCTGTGTACTGAAGTACCTCTCCTCCTTTATTGCACAAGAATATATCAAGTCCTCGAATATTTTGCTTGACAATGATCTGAACCCTCGTCTCTCAGACAATGGTTTCGCATCCTTTCACCAGCGTACTAGCCAAAATCTTGGGACGGGATATAATGCACCAGAGTGCACAAAACCTTCAGCTTTTACACAGAAGAGTGATGTATATACAGCTTTGGGGTGGGTGCTTACTAAGGCGCAAATGGAGGTGCAAACACAGATCGAGAAGGAAGGAGAAAGGAGAAAGAAGTGA 420 0.4381 MAPSMAIFTLNRRLQQSTHLEHKNQNCIGNRSGYRVSLYLPYSTCVLKYLSSFIAQEYIKSSNILLDNDLNPRLSDNGFASFHQRTSQNLGTGYNAPECTKPSAFTQKSDVYTALGWVLTKAQMEVQTQIEKEGERRKK 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g03244 139 Pfam Protein kinase domain 57 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g03244 139 SUPERFAMILY Protein kinase-like (PK-like) 59 113 IPR011009 -
Viun6g03244 139 Gene3D Transferase(Phosphotransferase) domain 1 17 130 - -
Viun6g03244 139 PANTHER OS01G0253100 PROTEIN 54 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g03244 Viun-Chr6 34214050 34214713 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g03244 54 113 Strubbelig Receptor Gene Family AT3G13065 76.667 1.62e-26 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Viun6g03244 Pkinase 2.8e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g03244 - - vun:114188637 283.878