Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g03237 ATGGAACTATCAGATTTGCAAAACAACAACCAAAGCAACACCAACACAAAAACAAACACACAAAGTGCTGTTGCTTCTGCTGCTGCTGCTGTTGTTGGAAAACACCATAATCACCAACAATCCTCTTCTTCACATCTCCCATCCCACTTCATCTCTTCCACAAACTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCCAATTCTTCCTCCTCCGCCTCAGCTTCTTCCCACATCATCGATGCCTCCCTGGCCATCGCCACCAGATCTGATGATTCCGCCAACAAGACCCAACAACTCCCCGCCACCGTCGCCGCGCCCTCCCCCGCCGCCAACCCCCCCAAGCGATCCACCAAGGACAGGCATACCAAGGTTGACGGCCGCGGCCGCAGAATCCGAATGCCCGCCACCTGTGCTGCTAGGGTTTTCCAGTTGACCAGGGAATTGGGTCACAAGTCCGACGGAGAGACCATCGAGTGGCTCCTCCAGCAGGCCGAGCCCGCCATCATCGCCGCCACCGGGACCGGCACCATCCCCGCTAATTTCTCCACACTCAACGTCTCCTTCCGCAGCAGCGGCTCCACGCTCTCGGCACCGCCCTCCAAGTCCGCCCCGCACACCTTTCACGGCGCGCTCGCACTCGCTCACCACCCTTACGAGGAAGCCTTTCAGCACACCGCTTTACTTGGCTTCCACCCTCACGCTCACGCTCACCAGCAGCACCAACAGCAGCACCAGCAGCACCAGCAGCAACAACTTCTTTCCGCCGATCAAATCGCGGAAGCGCTTCCCAGCGGCGGCGGGGACTCCGGCGACAGCTATCTCAGGAAACGCTACCGAGAAGATCTGTTCAAAGACGATAACATTAACACCCAATCACAGAACGAGAGCGGTGACGGTTCTTCGCCTAAAACCCCGAACCTACAGCTACCGAAGCAGCAGCAGCAGCCCCAGCAGCAAAACGAAGCTGGTTCTGGGCTTCTCAGGCCCACGAATTTGCTACCCGCCACAGCGATGTGGGCCGTGGCGCCCGCTCCCGCGAGTGGCCCTCCGGGCAGCACGATTTGGATGCTTCCGGTAACCGCGGCTTCTTCCGGTTCTGCTGCAGCTGCCGCTTCAGCTTCTGCTTCTTCTGGTGGTGGCGGTGGCGGTGGCGGATCCTCTGCGGGTTCGGAGAGTCAGATGTGGCCTTTTCCTCAGAGTGGTTTCATGCCAAGATTCAATCTTCCGAGTGCGCTTGAATTCCAAGGCGCACGTGCGGGTTCTCTGCAATTGGGGTCAATGTTAATGCCGCAGCAACCCTCTCAACATCTGGGTCTCGCCATGTCCGACTCCAACTTCGGCATGTTAGCTGCCCTTAATGCTTACTCTAGACCTGGTTTCAATATTAATTCAGACAATCATCATCCTCATCACCATCACCACCATCACCATCACCATCCCTTGGAGCATCAGCATCAACATCAACATCAACCTCAACCCAGTGAGAGTGGAGAAGATGCTCCTAATAGCTCCCAATGA 1518 0.5646 MELSDLQNNNQSNTNTKTNTQSAVASAAAAVVGKHHNHQQSSSSHLPSHFISSTNSSSSSSSSSSSNSSSSASASSHIIDASLAIATRSDDSANKTQQLPATVAAPSPAANPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSFRSSGSTLSAPPSKSAPHTFHGALALAHHPYEEAFQHTALLGFHPHAHAHQQHQQQHQQHQQQQLLSADQIAEALPSGGGDSGDSYLRKRYREDLFKDDNINTQSQNESGDGSSPKTPNLQLPKQQQQPQQQNEAGSGLLRPTNLLPATAMWAVAPAPASGPPGSTIWMLPVTAASSGSAAAAASASASSGGGGGGGGSSAGSESQMWPFPQSGFMPRFNLPSALEFQGARAGSLQLGSMLMPQQPSQHLGLAMSDSNFGMLAALNAYSRPGFNINSDNHHPHHHHHHHHHHPLEHQHQHQHQPQPSESGEDAPNSSQ 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g03237 505 MobiDBLite consensus disorder prediction 1 74 - -
Viun6g03237 505 MobiDBLite consensus disorder prediction 287 326 - -
Viun6g03237 505 MobiDBLite consensus disorder prediction 490 505 - -
Viun6g03237 505 MobiDBLite consensus disorder prediction 234 253 - -
Viun6g03237 505 MobiDBLite consensus disorder prediction 372 401 - -
Viun6g03237 505 MobiDBLite consensus disorder prediction 35 74 - -
Viun6g03237 505 Pfam TCP family transcription factor 116 253 IPR017887 -
Viun6g03237 505 MobiDBLite consensus disorder prediction 89 126 - -
Viun6g03237 505 MobiDBLite consensus disorder prediction 460 505 - -
Viun6g03237 505 MobiDBLite consensus disorder prediction 1 26 - -
Viun6g03237 505 MobiDBLite consensus disorder prediction 89 104 - -
Viun6g03237 505 MobiDBLite consensus disorder prediction 372 397 - -
Viun6g03237 505 ProSiteProfiles TCP domain profile. 117 171 IPR017887 -
Viun6g03237 505 MobiDBLite consensus disorder prediction 284 328 - -
Viun6g03237 505 MobiDBLite consensus disorder prediction 239 253 - -
Viun6g03237 505 MobiDBLite consensus disorder prediction 467 484 - -
Viun6g03237 505 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 35 449 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g03237 Viun-Chr6 34163480 34165876 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g03237 114 445 TCP Transcription Factor Family AT1G35560 47.006 2.19e-67 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Viun6g03237 TCP 1.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g03237 - - vra:106776202 673.315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g03237 6 34163480 34165876 Viun6g03237 6 34163480 34165876 ECH