Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g03222 TTCACAGATGCCTTCGATTCCTTGGATCCTTTTGGCAACATCACCATCACATGGGATTATTTCTCCGACAACGGGGACACAATCGACGTGAGGGTATCGATATACAACTTCCAACTATTTCGTCACGTGGAGGAGCCTGGTTGGAAATTGGGTTGGGCATGGAAAGGTGATGAGGTGATTTGGGCAATGCTGGGAGCAGAGGCAAAGGAGCAAGGGAATTGCACAAGATTCAGAGGACAACAGAAACCACATTGTTGCAAGAAGGAGCCAGTTATCATTGATCTAATGCCTGGAACCCCCTACAACATGCAGACCGCAAATTGCTGCAAAGGTGGGGTTCTAACATCCTTAAAACAAGATCATACCAAACGTGGTGCCACCTTCCAAATGAATTATGCAAAACCATCACTCTCTGCTTCAGCTATGCCAGAAAATTTCACCCTTGGAATTCCTGGCTATAGCTGTGGGACACCGTTTCAAGTCCCACCAACCAAGTTTACCAAAGATGGACACAGATGGCAACAAGTCTTGGAGACTTGGAATGTGACTTGTATTTACTCCCAGTTTCTAGCGTCACCTGCTCCAAAATGTTGTGTCTCTTTGTCTGCATTCTACAACAGTACCATTGTTCATTGTCCCACATGCAGTTGTAATTGCCGAGGACTACCAGGAGCGACTTGTGTGGATTCTGATAAGACTTCGGTGCTGCAACTACCGCAACCAAATCGCGGAGAAGCATCAGCATCGGTGATCAGGTGTTCGCATCACATGTGCCCCATTCGCATTCACTGGCATGTGAAGCAGAGTTATAAAGAGCATTGGCGGGTGAAGATCACGATTACAAACATGAACTTTGTGAAAAACTATTCCCAATGGAATCTGGTGGTGTTGCACCCGAACTTGCGAAGTGTAACCCAGGTTTTCAGTTTCAACTACGAAGCTCTAAGGGTTTATGGAAATTTGAGTGACGTAGGGATGTTTTGGGGGCTAGCGTATTACAATGAGATGTTGCTGACGCATGGAGAGAATGGGAATGTGCAAACAGAGGTTTTACTGCACAAAGATCGAGGAGAGTTCAGCTTCAGAGAAGGGTGGAGTTTTCCTAGAAAAGTTTCATTCAATGGCGATGAATGTGTTATGCCATCTCCTGATGCCTACCCTACACTTCCCAACACAGCTCATACTGCTACAACAACCCTTAACACAATTTTCTTTTCACTGTTACTAATACTCTTCTAG 1239 0.4536 FTDAFDSLDPFGNITITWDYFSDNGDTIDVRVSIYNFQLFRHVEEPGWKLGWAWKGDEVIWAMLGAEAKEQGNCTRFRGQQKPHCCKKEPVIIDLMPGTPYNMQTANCCKGGVLTSLKQDHTKRGATFQMNYAKPSLSASAMPENFTLGIPGYSCGTPFQVPPTKFTKDGHRWQQVLETWNVTCIYSQFLASPAPKCCVSLSAFYNSTIVHCPTCSCNCRGLPGATCVDSDKTSVLQLPQPNRGEASASVIRCSHHMCPIRIHWHVKQSYKEHWRVKITITNMNFVKNYSQWNLVVLHPNLRSVTQVFSFNYEALRVYGNLSDVGMFWGLAYYNEMLLTHGENGNVQTEVLLHKDRGEFSFREGWSFPRKVSFNGDECVMPSPDAYPTLPNTAHTATTTLNTIFFSLLLILF 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g03222 412 PANTHER PROTEIN COBRA 3 407 IPR006918 GO:0010215|GO:0016020
Viun6g03222 412 Pfam COBRA-like protein 30 187 IPR006918 GO:0010215|GO:0016020
Viun6g03222 412 PIRSF COBRA 1 412 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g03222 Viun-Chr6 34061244 34062951 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g03222 3 412 COBRA Gene Family AT3G29810 52.163 1.33e-158 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g03222 - - lang:109329241 669.463