Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun6g03212 | ATGGAGTATGCAGCTGGTGGAGAGCTCTTTGAGAGGATTTGCAGTGCTGGAAGATTCAGTGAAGACGAGGCTCGATATTTCTTCCAGCAGCTCATCTCAGGAGTTAGCTACTGTCATTCCATGCAAATCTGTCATCGAGACTTGAAGCTTGAGAACACCTTATTGGATGGCAGCCCTGCCCCACGGCTCAAAATTTGTGATTTTGGTTATTCTAAGTCATCCCTGCTTCATTCAAGGCCTAAGTCAACTGTGGGAACCCCAGCCTACATTGCGCCTGAGGTTCTTTCACGCAGAGAATATGATGGAAAGCTAGCCGATGTATGGTCCTGTGGAGTGACTCTTTATGTAATGTTGGTGGGAGCATACCCATTTGAAGACCAAGACGATCCCAAAAATTTCAGGAAAACCATCAATAGAATTATGGCTGTTCAATACAAGATCCCCGACTATGTTCACATATCTCAAGACTGCAGACATCTGCTATCTCGCATTTTTGTGGCAAATCCAGTTAGGAGAATTACCATTAAGGAAATCAAGTCCCACCCATGGTTTTTAAAGAACTTGCCTAGAGAATTAACAGAAGTAGCTCAAGCTGCCTACTACAGAAAAGAAAATCCAACCTTTTCTCTTCAGAGTATAGAAGACATCATGAATATTGTTGAGGAGGCCAAGATTCCACCTCCGGCATCCAGGTCAGTTGGAGGATTTGGTTGGGGAGGAGAAGAAGATGAGGATGAAACAAAAGAAGCAGAGGTTGAGGCTGAAGAAGATGAGTATGAAAAAAGAGTCAAAGAAGCACAGGCAAGCGGGGAATTTCATGTTAGTTAG | 828 | 0.4384 | MEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFRKTINRIMAVQYKIPDYVHISQDCRHLLSRIFVANPVRRITIKEIKSHPWFLKNLPRELTEVAQAAYYRKENPTFSLQSIEDIMNIVEEAKIPPPASRSVGGFGWGGEEDEDETKEAEVEAEEDEYEKRVKEAQASGEFHVS | 275 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun6g03212 | 275 | MobiDBLite | consensus disorder prediction | 228 | 275 | - | - | |
Viun6g03212 | 275 | ProSiteProfiles | Protein kinase domain profile. | 1 | 184 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun6g03212 | 275 | FunFam | Serine/threonine-protein kinase SRK2A | 4 | 192 | - | - | |
Viun6g03212 | 275 | SMART | serkin_6 | 1 | 184 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun6g03212 | 275 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 43 | 55 | IPR008271 | GO:0004672|GO:0006468 | |
Viun6g03212 | 275 | Coils | Coil | 249 | 269 | - | - | |
Viun6g03212 | 275 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 219 | IPR011009 | - | |
Viun6g03212 | 275 | Pfam | Protein kinase domain | 1 | 184 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun6g03212 | 275 | PANTHER | SERINE/THREONINE KINASE | 1 | 222 | - | - | |
Viun6g03212 | 275 | MobiDBLite | consensus disorder prediction | 239 | 254 | - | - | |
Viun6g03212 | 275 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 226 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun6g03212 | Viun-Chr6 | 34009246 | 34012383 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun6g03212 | 1 | 187 | CBL-interacting serine-threonine protein kinases | AT4G24400 | 47.396 | 3.50e-51 | 171 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_OST1L | Viun6g03212 | Pkinase | 1.7e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun6g03212 | K14498 | - | gmx:100812259 | 496.508 |