Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g03137 ATGGCATCGTCGAAGGTGGTGGTGACGACGAATCCCGATGTGGCGGCGCAGAGTTCGATTTCGAGCCAGGTATGGGACGAGGTGGTCGGCGGCGCTGAGTCTCAGGACATGGCAATCAGCCTCCACGATTTGTTGTTGACCTCCGTTGCCAGAAACGACGCCGTTCCGCCCTCTCATGGGGGAAGGGGAAAGAGAAAGGCCGTGGAGGAAGCCGTCGTGGATAGGGCTACTCTTCAGAAACAGAGAAGGATGATCAAAAACAGAGAATCTGCCGCTAGGTCCAGGGAACGCAAACAGGCTTATACAGTTGAGTTAGAGTCTTTGGTTACACTTCTCGAGGAAGAGAATGCTCGATTGTTAAAGGAAGAGGCTGAAAGGAGAAAGCAGAGGTTCAATCAGCTGATGGAGTGCCTTATTCCAGTTGAGGAGAAGAGTAAACCAAGACGAATGCTTCGGCGAGTGAATTCAGCACAGTGGTGA 480 0.5229 MASSKVVVTTNPDVAAQSSISSQVWDEVVGGAESQDMAISLHDLLLTSVARNDAVPPSHGGRGKRKAVEEAVVDRATLQKQRRMIKNRESAARSRERKQAYTVELESLVTLLEEENARLLKEEAERRKQRFNQLMECLIPVEEKSKPRRMLRRVNSAQW 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g03137 159 Gene3D - 78 133 - -
Viun6g03137 159 SMART brlzneu 75 139 IPR004827 GO:0003700|GO:0006355
Viun6g03137 159 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 82 97 IPR004827 GO:0003700|GO:0006355
Viun6g03137 159 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 78 138 - -
Viun6g03137 159 Coils Coil 102 134 - -
Viun6g03137 159 CDD bZIP_plant_BZIP46 79 125 - -
Viun6g03137 159 Pfam bZIP transcription factor 77 129 IPR004827 GO:0003700|GO:0006355
Viun6g03137 159 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 77 129 IPR004827 GO:0003700|GO:0006355
Viun6g03137 159 SUPERFAMILY Leucine zipper domain 79 130 IPR046347 GO:0003700|GO:0006355
Viun6g03137 159 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 54 158 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g03137 Viun-Chr6 33643880 33646446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g03137 60 159 bZIP Transcription Factor Family AT5G44080 60.784 5.19e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun6g03137 bZIP_1 9.7e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g03137 K14432 - gmx:100101878 186.808