Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g03128 ATGGTAGAAATGAAGGGAGTGATGAACGCAATGCATGGGTTGAAACCAGTGTTGCTGATGGTGTTAGTGCAGATTGCATACACTGCTGTCAATGTGCTTTTCAAACTCGCCATAAACGACGGAATGAGTGTAAAAGTTGCTACAACGTATCGTCTCGCTTTTGGATCTGCTTTCACTGTTCCTCTCGCTCTCATTTCTGAAAGGAAGAAAAGACCAAAGATGACTTGGAGGGTGCTTTTCATGGCATTTCTTTGTGGATTATTCGGGGGAAGTTTATTTCAAAACCTTTTCTACGAGTCCTTGGCTTTAACATCAGCAACGTTTGCCTCCGCTCTCTACAATCTCATTCCAGCTATCACCTTTGTGTTGGCCATCTCCTGCGGTTTGGAAAGGTTGAATTTGAGAGCAGCCGCAGGAAGGGCCAAGGTGTTGGGAACTGTAATTGGGATTGGTGGGGCAATGGTGTTGACTTTTATCAGAGGCGCAGAAATTAATATCTGGCCCTTCCACATCAACCTTATGCATCCACGTCAGCACCAAGAGAGCCACGTGGCAGAGTCTAGCAATACATTGTTGGGTGCTCTTTGTTCCATAGCAAGCTGCTTCTCTTTTTCTCTCTGGCTCACCATTCAGGCCAAGATGAGCAAAGAATACCCTTGTCACTATTCGAGCACGGCTATGATGTCTACATTAGGAGCAATACAAGCCGCAGCTTTTGGTTTCTGCTTCGAGAGAGATTTCAGCCAATGGAAGTTGGGTTGGAATATTAGACTACTTGCTGTCGCTTATTCGGGAATCGTGGCCTCTGGAATAGTAGTTATTATTACAGCATGGTGCATACAAATGAGAGGGCCTCTGTTTGCGTCTGTTTTCAACCCTCTGATGCTTGTGCTTGTGGCTATTGCTGGTTCTTTGATGCTGAACGAGAGCTTGTATGTAGGAAGTGTGGTTGGGGCAGTGCTGATTGTGTGCGGGTTGTACATGGTTCTGTGGGGTAAAAGTAAAGAGATGAAAAACATCACTCAGTTAGTGCCATCAGAGACCATCCGAGAAGCCGAAGCCGTAGAAGTTGTTGTCGTGTCCACGCCAATGGATTATGAAAAGTGCGACCACAACAACAACCGAAGCGAAATCACTGCTACTACAAGGAATGTCGACAAAGATTGTGAGGATTTTAACAAAAAGTAA 1188 0.4529 MVEMKGVMNAMHGLKPVLLMVLVQIAYTAVNVLFKLAINDGMSVKVATTYRLAFGSAFTVPLALISERKKRPKMTWRVLFMAFLCGLFGGSLFQNLFYESLALTSATFASALYNLIPAITFVLAISCGLERLNLRAAAGRAKVLGTVIGIGGAMVLTFIRGAEINIWPFHINLMHPRQHQESHVAESSNTLLGALCSIASCFSFSLWLTIQAKMSKEYPCHYSSTAMMSTLGAIQAAAFGFCFERDFSQWKLGWNIRLLAVAYSGIVASGIVVIITAWCIQMRGPLFASVFNPLMLVLVAIAGSLMLNESLYVGSVVGAVLIVCGLYMVLWGKSKEMKNITQLVPSETIREAEAVEVVVVSTPMDYEKCDHNNNRSEITATTRNVDKDCEDFNKK 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g03128 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 150 - -
Viun6g03128 395 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020
Viun6g03128 395 Pfam EamA-like transporter family 15 157 IPR000620 GO:0016020
Viun6g03128 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 335 - -
Viun6g03128 395 PANTHER WAT1-RELATED PROTEIN 15 342 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g03128 Viun-Chr6 33602945 33605035 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g03128 14 388 Nodulin-like Gene Family AT1G25270 40.000 1.49e-94 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g03128 - - gmx:100798755 651.744