Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g03127 ATGAGAGATATAGGGGAAGTCGTGCATGGCTTGAAACCAGCCCTGCTGATGTTGATGGTGCAGATTGCATTTGCTTCCGTGAACGTGCTCTACAAACTTGCCATAAATGATGGAATGAGTGTGAGAATAATCACTGCCTACCGTCTCATTTTCGCAGCAGCTTCTACAGTTCCTCTTGCTCTTATTTTTGAAAGGAAAAACTTACAAACGCTGACTTGGAGGGTGATTTTGAAGTCATTTTTCTGTGGATTATTCGGGGGAAGTCTATTCCAAAACCTTTATTTCGAGTCCTTGAAATTGATTTCAGCAACATTTGCTTCCGCTGTTTTTAACCTCATTCCTGCAGTCACTTTTATCTTGGCCGTCACTTGCGGTTTCGAGAAATTAAATTTCCAAAGGGTAGCTGGTAAGGCTAAGGTGTTGGGAACGATAACCGGAGTTGGCGGGGCAATGATGTTGACCTTTCTCAAAGGTGTAGAAATCAACATTTGGAACTTCCACATTAACCTTTTGCATAAAAAGGGTACCACGGAAACACTAAATGGTGACTCTGGAAGTAAATTGCTGGGAGTTTTTTGTGGTCTTGGAAGCTGCTTATGTTTTGCATTATGGCTCATTATTCAGGCTGAGATGAGTAAAGAGTTCCCAGGCCATCACTCAAGTACAGCTTTGATGTCAATAATGGGGGCAATTCAAGCCACTGTTTTTGCCCTGTGCATTGAGAAGGATTGGAGCCAATGGAGATTGGGTTGGAGCATTAGGCTTCTAGCTGCAGCATATTCGGGAATTGTGGCTTCTGGAATAATGGTTGTTGTGATAGCATGGTGTGTGAGAATGAGGGGTCCATTGTTTGCATCTGTTTTCAATCCTCTTCTGCTAGTGCTAGTGGCCATTGCTGGTTCCTTGATGTTGGATGAGAATCTATACGTAGGAAGTGTGATAGGAGCAGTGCTAATTGTGATGGGATTGTACATGGTGCTGTGGGGTAAGAGCAAGGAAATGGAAAGAGTGAGTGACTTAGAAACTACTCCAGAATTAGAAGAAATTGAGGTTGTTGTGACGTGTAGGGCAACAGAGGATGATAAAAGTGTGTACAGCAACGACAAGTACACCTGTAGTGAGAGGAACATTATTGAGAAGGATAATGATGATGCTTCAAAAAGCAGAGATGAAGGACAAGACAACGAAAGTAATGGGAAGAAACCTTGA 1209 0.4268 MRDIGEVVHGLKPALLMLMVQIAFASVNVLYKLAINDGMSVRIITAYRLIFAAASTVPLALIFERKNLQTLTWRVILKSFFCGLFGGSLFQNLYFESLKLISATFASAVFNLIPAVTFILAVTCGFEKLNFQRVAGKAKVLGTITGVGGAMMLTFLKGVEINIWNFHINLLHKKGTTETLNGDSGSKLLGVFCGLGSCLCFALWLIIQAEMSKEFPGHHSSTALMSIMGAIQATVFALCIEKDWSQWRLGWSIRLLAAAYSGIVASGIMVVVIAWCVRMRGPLFASVFNPLLLVLVAIAGSLMLDENLYVGSVIGAVLIVMGLYMVLWGKSKEMERVSDLETTPELEEIEVVVTCRATEDDKSVYSNDKYTCSERNIIEKDNDDASKSRDEGQDNESNGKKP 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g03127 402 PANTHER WAT1-RELATED PROTEIN 12 339 IPR030184 GO:0016020|GO:0022857
Viun6g03127 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 332 - -
Viun6g03127 402 MobiDBLite consensus disorder prediction 376 402 - -
Viun6g03127 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 142 - -
Viun6g03127 402 Pfam EamA-like transporter family 12 137 IPR000620 GO:0016020
Viun6g03127 402 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g03127 Viun-Chr6 33584510 33586716 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g03127 11 351 Nodulin-like Gene Family AT1G25270 40.580 1.77e-89 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g03127 - - pvu:PHAVU_006G210200g 550.051