Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g03126 ATGATTTGTGGGAAGACGAGGAAGAAGATGACTTGGACGATACTTTTTCAGGCATTCGTATGCGGCTTAATTGGTGGAGCATTGCCTCAAAACCTAAACATGGAAGCAATCGCTCTAACTTCAGTAACGTTCACTACTGCCATATCCAATCTCATCCCAGCCCTCACCTTCATCATATCCCTTTCTTTCGGATTGGAGAGATTGAATTTAAGAACAGGAGCAGGGAAAGCGAAGATAATTGGAACGATAACAGGAATTAGTGGAGCAATGATTCTAACTTTCGTGAAAGGCCCAGAAGTTCAGATGCTGTCGTTCCACATAAATCTTTTCAACCATCCAAACGGCAATGTCGTACATCCACACGCTACTTCTGGCGTTATGACCATATTCGGTGCACTCGCGTCTGTCGCAAGCAACGTCTCTTATGCACTATGGCTTATCATTCAGGCAAAAATGAGTGAAAGATACCCTTGTCCGTATTCAAGCACAGCCTTAATGTCCCTAATGGGGGCACTGTTATCCGTTTCTTATGCATTTTGTGTTGAAAGGGATTTGAATGAGTGGAGATTGGGTTGGAATATCAGACTCTTCACTGTAGCTTATGCGGGTATAGTGGTTTCTGGAGTGATGGTGGCTGTGATTTCGTGGTGTGTACGCGCCAGAGGTCCATTGTTTGTTTCTATTTTTAGCCCTCTTATGCTTGTGGTTGTGGCATTTGCTGGATCCACTATTTTGGACGAGAAGTTATACCTTGGCAGCATAATTGGATCGGTGATGATTATTTGCGGATTATACGTGGTTTTGTGGGGCAAAAGCAAAGAGATGATGAAGAAAGCGGTTTCATCAGAAAGCACCCATAAATTAGACACAGTTGAAATAATGGTCAAACCTGCAGTAGAAAAAAAGAGCAACAATAGCAATAGCCAGGCGAATGAAGTAATTGCGGTTGGAGTAAATGGAGAGAAGTAA 969 0.4293 MICGKTRKKMTWTILFQAFVCGLIGGALPQNLNMEAIALTSVTFTTAISNLIPALTFIISLSFGLERLNLRTGAGKAKIIGTITGISGAMILTFVKGPEVQMLSFHINLFNHPNGNVVHPHATSGVMTIFGALASVASNVSYALWLIIQAKMSERYPCPYSSTALMSLMGALLSVSYAFCVERDLNEWRLGWNIRLFTVAYAGIVVSGVMVAVISWCVRARGPLFVSIFSPLMLVVVAFAGSTILDEKLYLGSIIGSVMIICGLYVVLWGKSKEMMKKAVSSESTHKLDTVEIMVKPAVEKKSNNSNSQANEVIAVGVNGEK 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g03126 322 SUPERFAMILY Multidrug resistance efflux transporter EmrE 8 84 - -
Viun6g03126 322 SUPERFAMILY Multidrug resistance efflux transporter EmrE 190 272 - -
Viun6g03126 322 PANTHER WAT1-RELATED PROTEIN 9 281 IPR030184 GO:0016020|GO:0022857
Viun6g03126 322 Pfam EamA-like transporter family 130 268 IPR000620 GO:0016020
Viun6g03126 322 Pfam EamA-like transporter family 9 84 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g03126 Viun-Chr6 33572785 33576562 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g03126 25 287 Nodulin-like Gene Family AT1G68170 46.008 5.33e-80 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g03126 - - gmx:100788378 528.094