Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g03125 ATGGAGAAGTGGAACGTGGTGCATGCATTGAAACCAGTTCTGCTAATGGTGTTGGTGCAGGTTGCAAATGCTTGGGTCAATGTTCTCTACAAACTCGCACTTAACGATGGCATGAACTTGAGTATCATCGTTGCTTACCGCTATGTTTTTGCCACTGCTTTCATTTCTCCACTGGCTTTTCTTATTGAAAGGAAGACGAGGAAGAAGATGACTTGGACGATACTTTTTCAGGCATTCGTATGCGGCTTAATTGGTGGAGCATTGCCTCAAAACCTAAACATGGAAGCAATCGCTCTAACTTCAGTAACGTTCACTACTGCCATATCCAATCTCATCCCAGCCCTCACCTTCATCATATCCCTTTCTTTCGGATTGGAGAGATTGAATTTAAGAACAGGAGCAGGGAAAGCGAAGATAATTGGAACGATAACAGGAATTAGTGGAGCAATGATTCTAACTTTCGTGAAAGGCCCAGAAGTTCAGATGCTGTCGTTCCACATAAATCTTTTCAACCATCCAAACGGCAATGTCGTACATCCACACGCTACTTCTGGCGTTATGACCATATTCGGTGCACTCGCGTCTGTCGCAAGCAACGTCTCTTATGCACTATGGCTTATCATTCAGGCAAAAATGAGTGAAAGATACCCTTGTCCGTATTCAAGCACAGCCTTAATGTCCCTAATGGGGGCACTGTTATCCGTTTCTTATGCATTTTGTGTTGAAAGGGATTTGAATGAGTGGAGATTGGGTTGGAATATCAGACTCTTCACTGTAGCTTATGCGGGTATAGTGGTTTCTGGAGTGATGGTGGCTGTGATTTCGTGGTGTGTACGCGCCAGAGGTCCATTGTTTGTTTCTATTTTTAGCCCTCTTATGCTTGTGGTTGTGGCATTTGCTGGATCCACTATTTTGGACGAGAAGTTATACCTTGGCAGCATAATTGGATCGGTGATGATTATTTGCGGATTATACGTGGTTTTGTGGGGCAAAAGCAAAGAGATGATGAAGAAAGCGGTTTCATCAGAAAGCACCCATAAATTAGACACAGTTGAAATAATGGTCAAACCTGCAGTAGAAAAAAAGAGCAACAATAGCAATAGCCAGGCGAATGAAGTAATTGCGGTTGGAGTAAATGGAGAGAAGTAA 1149 0.4308 MEKWNVVHALKPVLLMVLVQVANAWVNVLYKLALNDGMNLSIIVAYRYVFATAFISPLAFLIERKTRKKMTWTILFQAFVCGLIGGALPQNLNMEAIALTSVTFTTAISNLIPALTFIISLSFGLERLNLRTGAGKAKIIGTITGISGAMILTFVKGPEVQMLSFHINLFNHPNGNVVHPHATSGVMTIFGALASVASNVSYALWLIIQAKMSERYPCPYSSTALMSLMGALLSVSYAFCVERDLNEWRLGWNIRLFTVAYAGIVVSGVMVAVISWCVRARGPLFVSIFSPLMLVVVAFAGSTILDEKLYLGSIIGSVMIICGLYVVLWGKSKEMMKKAVSSESTHKLDTVEIMVKPAVEKKSNNSNSQANEVIAVGVNGEK 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g03125 382 PANTHER WAT1-RELATED PROTEIN 11 341 IPR030184 GO:0016020|GO:0022857
Viun6g03125 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 144 - -
Viun6g03125 382 Pfam EamA-like transporter family 11 143 IPR000620 GO:0016020
Viun6g03125 382 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020
Viun6g03125 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g03125 Viun-Chr6 33572785 33576792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g03125 2 347 Nodulin-like Gene Family AT1G68170 45.087 3.47e-102 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g03125 - - gmx:100788378 640.573