Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g03114 ATGAAAAATGTGTGCAATGTGGTGCAGGCCATGAAACCTACCCTGCTGATGCTGGTGGTGCAAATAGCATTTGCCGGTGTTAATATCTTCTACAAGCTTGCCGTGAATGATGGCATGAGCTTGAGGGTCATTGTTGCCTACCGTTTTCTATTTGCCACCACTTTCATTGCTCCACTTGCTCTCATTCTTGAAAGGAAGAAGAGGACAAAGATGAATCGGACCATACTGTTTCAGTCATTCCTTTGCGGCTTATTTGGGGGATCTTTAGCTCAGAATTTCTACTTGCAAGCTCTGTCGTTAACATCTGCAACATTTGCATCTGCAATGGCTAATCTTGTACCAGCCATAACCTTCATCATGGCCGTTTGCTTTGGTTTGGAAAGATTGAATTTGAAAACAACACCAGGGAAGGCCAAAATAATGGGTACATTAATTGGAATTAGTGGGGCAATGGTGCTTACATTTGTTAAAGGTAAAGATATTAAGATAGGAACCTTTCACTTCAATCTTTTGCATCAGAAGGGTGCGCACCCGCAGGTGCATGCCACCGCTGGTGCCAACATCGTCATGGGTGCTTTGTGCGCACTGGCTAGTGGAGTCAGTTATGCGTCCTGGCTCATCATTCAGGCGAAGATGAGTAAAAAATACCCTAATCCGTACTCTAGCACTGCGTTGATGTCACTGTGGGGAGCATTAGTGTCCATCGTGTTTGCACTTTGCCTTGAGAGGGACTGGAGTCAGTGGAGGTTGGGTTGGAATATTAGGCTTTGGACCGCAGCATATGCGGGTATTGTGGTTTCTGGGATTATGGTGGTTGTGATTTCATGGTGCATCAAAATGAGAGGCCCATTATTTGTCTCTGTTTTTAACCCTCTGATGCTAGTGATAGTGGCCTTGGCTGGTTCTACCATGTTGAAGGAGAAGCTACACCTTGGATGCATTATTGGAGCAGTGCTGATTGTGGGTGGCTTATACATGGTTTTATGGGGTAAAAGTAAAGAGATGAAGAAAAGTGATGAATTGGTGGCAGCACATAGCCCCCATGAGGAGGAGTCTGTTAGGGTGGAAGTAGTAGTGAGGGGTGAAGTAGAAGATGAAAGCAAGCAAAAGAAAAGACATGAGAATGATGAAAAGCTAGAGCAGAATTCACATGTAGCAAGTGAGAGTAACCAAGGAAGAGATGAGGAAAAATCTAATACTCTTCTATGTACTTAA 1215 0.442 MKNVCNVVQAMKPTLLMLVVQIAFAGVNIFYKLAVNDGMSLRVIVAYRFLFATTFIAPLALILERKKRTKMNRTILFQSFLCGLFGGSLAQNFYLQALSLTSATFASAMANLVPAITFIMAVCFGLERLNLKTTPGKAKIMGTLIGISGAMVLTFVKGKDIKIGTFHFNLLHQKGAHPQVHATAGANIVMGALCALASGVSYASWLIIQAKMSKKYPNPYSSTALMSLWGALVSIVFALCLERDWSQWRLGWNIRLWTAAYAGIVVSGIMVVVISWCIKMRGPLFVSVFNPLMLVIVALAGSTMLKEKLHLGCIIGAVLIVGGLYMVLWGKSKEMKKSDELVAAHSPHEEESVRVEVVVRGEVEDESKQKKRHENDEKLEQNSHVASESNQGRDEEKSNTLLCT 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g03114 404 MobiDBLite consensus disorder prediction 360 404 - -
Viun6g03114 404 MobiDBLite consensus disorder prediction 360 395 - -
Viun6g03114 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 156 - -
Viun6g03114 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 228 333 - -
Viun6g03114 404 PANTHER WAT1-RELATED PROTEIN 12 340 IPR030184 GO:0016020|GO:0022857
Viun6g03114 404 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020
Viun6g03114 404 Pfam EamA-like transporter family 12 154 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g03114 Viun-Chr6 33479456 33483244 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g03114 1 352 Nodulin-like Gene Family AT1G68170 46.023 2.94e-100 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g03114 - - vra:106774988 610.527