Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g03113 ATGATGATGGTGCTCTTTGTTTTGTCTCTCTTATTCTTCTCATTCTTAATGGTTTGTTCTGATGGTCAGCTTCAAGTGGGTTTCTACTCCAACACTTGTCCTCAGGTAGATTCCATTGTCCGCGACGTTGTTAGAGAAGCTGCTCTCTCTGATACCAACATGGCTGCTGTTTTGCTCAGACTTCATTTTCATGACTGTTTTGTTGAGGGATGTGATGGTTCAATTCTGATCGACAATGGTCCAGAATCAGAGAGAAACGCATTTGGACATCAGGGGGTTAGAGGGTTTGATGTGATAGAAAAAGCCAAGGCACAATTAGAAGGTTCTTGTCCTGGTGTGGTTTCTTGTGCAGACATAGTGGCATTGGCAGCTAGAGAAGCTATTGTCTTGGCGAATGGACCAACATATGAAGTTCCAACGGGTCGGAGAGATGGGTTGGTTTCAAATGTTTCTCTTGCAGATGACATGCCAGATGTTAGTGATTCGATTGAGCTACTCAAGACCAAGTTTCTGAATAAGGGTCTCACTGTCAAAGACCTTGTTCTTCTCAGTGGTGCACATACAATTGGAACCACAGCATGCTTCTTTATGACTAGAAGACTGTACAACTTTTTTCCAAGTGGTGAGGGATCAGACCCATCGATTAGTCCAAATTTTCTTCCACAGTTGCAGGCAACGTGCCCTCAGAATGGGGATGTTAATGTTCGGCTAGCCATTGACGAAGGTAGTGAACAGAGTTTTGACGTACACATTCTGAAGAACATAAGGGAAGGTTTTGCTGTGTTAGAATCTGATGCCAGACTTAATGATGACATAGCCACAAAGAATGTTCTTGACTCTTACTTTTCTCCATTTGGTCAAACGTTTGAGCCTTCTTTTGAAGCTGACTTTGTTGATTCATTCGTGAGGATGGGTCAAATCGATGTCAAGACAGGTTTCCTTGGAGAAATCAGGACAGTGTGTTCACAATTCAACTGA 978 0.4284 MMMVLFVLSLLFFSFLMVCSDGQLQVGFYSNTCPQVDSIVRDVVREAALSDTNMAAVLLRLHFHDCFVEGCDGSILIDNGPESERNAFGHQGVRGFDVIEKAKAQLEGSCPGVVSCADIVALAAREAIVLANGPTYEVPTGRRDGLVSNVSLADDMPDVSDSIELLKTKFLNKGLTVKDLVLLSGAHTIGTTACFFMTRRLYNFFPSGEGSDPSISPNFLPQLQATCPQNGDVNVRLAIDEGSEQSFDVHILKNIREGFAVLESDARLNDDIATKNVLDSYFSPFGQTFEPSFEADFVDSFVRMGQIDVKTGFLGEIRTVCSQFN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g03113 325 ProSiteProfiles Plant heme peroxidase family profile. 23 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g03113 325 CDD secretory_peroxidase 23 324 IPR033905 GO:0004601|GO:0042744
Viun6g03113 325 PANTHER PEROXIDASE 25-RELATED 10 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g03113 325 FunFam Peroxidase 27 167 - -
Viun6g03113 325 SUPERFAMILY Heme-dependent peroxidases 23 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Viun6g03113 325 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Viun6g03113 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 179 189 IPR019793 -
Viun6g03113 325 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g03113 325 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g03113 325 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g03113 325 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g03113 325 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g03113 325 PRINTS Plant peroxidase signature 178 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g03113 325 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g03113 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g03113 325 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun6g03113 325 Gene3D Peroxidase, domain 2 157 304 - -
Viun6g03113 325 Pfam Peroxidase 40 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g03113 325 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g03113 325 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g03113 325 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g03113 325 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun6g03113 325 FunFam Peroxidase 157 304 - -
Viun6g03113 325 Gene3D - 27 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g03113 Viun-Chr6 33472367 33475060 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g03113 1 325 Peroxidase AT1G77100 55.352 1.49e-117 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g03113 K00430 - vra:106774988 581.252