Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun6g03099 | ATGGAGAGAGTGACTTCATCTTTTATGAGTTTCTTTTTTGTTTGGGCAATTTTGGTGCTTGATTTGGTACTTAAGACTTCTGGCAATCAGGAAGGCGATGCCCTGAATGCATTGAAGAGCAACTTGCTTGATCCTAACAACGTTCTTCAAAGCTGGGATGCTACTCTTGTCAATCCCTGCACTTGGTTTCATGTTACGTGCAATAGTGATAACAGTGTGACCCGTGTTGATCTTGGAAATGCAGACCTTTCTGGTCAACTGGTTTCACAACTTGGTCAGCTCACAAATTTACAGTACTTGGAACTTTATAGTAATAATATAACCGGAAAAATTCCAGATGAGCTTGGAAACTTGACAAACTTGGTGAGCTTGGATCTGTACTTGAACAATTTAACTGGTTCTATACCAACTACGCTGGGCAACCTTGCAAAACTACGTTTCCTGCGTCTCAACAATAATACCTTGACGGGAGGCATACCCATGTCTCTGACAAATGTTTCTTCTCTGCAAGTTCTTGATCTCTCGAACAACAAGCTAAAAGGGAATATCCCAGTGAATGGTTCATTTTCATTGTTTACCCCCATCAGTTATCAAAATAATCCTGACTTGATACAGCCCAAAAACTCTCCATCTCCAGTTTCTCCAACTCCACCACCAGCTTCTTCAGGAAATAGTAACACTGGAGCTATTGCTGGAGGAGTTGCTGCTGGTGCTGCTCTGTTGTTTGCAGCCCCTGCAATTGCACTTGCTTATTGGCGAAGAAGGAAACCTCAGGATCATTTCTTTGATGTTCCTGCTGAGGAGGATCCTGAAGTTCACCTTGGTCAACTTAAAAGGTTTTCGCTACGTGAGCTGCAAGTTGCCACCGATAACTTTAGTAACAAACACATTTTGGGTAGAGGTGGATTTGGAAAGGTTTATAAAGGACGCTTAGCTGATGGATCTCTTGTGGCTGTGAAAAGGCTTAAAGAGGAACGTACGCAGGGTGGGGAGCTCCAATTTCAAACTGAAGTGGAAATGATCAGCATGGCTGTGCATCGTAATTTGCTTCGGCTTCGTGGTTTTTGTATGACACCTACCGAACGATTGCTTGTGTATCCTTTCATGGCTAATGGAAGTGTAGCATCATGTTTACGAGAACGTCAAGAATCTCAACCACCGCTTGGCTGGCCAGAACGGAAGCGTATTGCACTGGGATCTGCGCGGGGGCTTGCTTATTTACATGATCATTGTGACCCTAAGATTATTCATCGTGATGTCAAAGCAGCAAATATTTTGTTGGATGAGGAATTTGAAGCAGTTGTTGGAGATTTTGGTTTAGCAAAACTTATGGATTATAAAGATACTCACGTTACTACTGCTGTACGTGGAACAATTGGGCATATAGCGCCTGAGTACCTTTCAACTGGAAAATCTTCAGAGAAAACTGATGTTTTTGGATATGGTGTGATGCTTCTTGAACTCATAACTGGACAAAGGGCTTTCGATCTAGCTCGACTTGCCAATGATGACGATGTGATGTTGCTTGATTGGGTTAAAGGACTTCTCAAAGACAGGAAATTGGAAACACTGGTGGATGCAGATTTACAGGGCAATTATATTGATGAGGAGGTTGAGCAATTAATCCAAGTGGCATTGCTATGCACACAGGGCTCTCCTATGGAAAGACCAAAGATGTCTGAGGTGGTGAGAATGCTAGAAGGTGATGGTTTGGCTGAGAAATGGGAGCAATGGCAGAAAGATGAGACGTTCCGGCAAGACTTCAACAACAACATTCATCACCCTAATGCAAATTGGATAGTAGATTCAACTTCCCACATCCAAGCAGATGAACTGTCAGGTCCTAGATGA | 1851 | 0.429 | MERVTSSFMSFFFVWAILVLDLVLKTSGNQEGDALNALKSNLLDPNNVLQSWDATLVNPCTWFHVTCNSDNSVTRVDLGNADLSGQLVSQLGQLTNLQYLELYSNNITGKIPDELGNLTNLVSLDLYLNNLTGSIPTTLGNLAKLRFLRLNNNTLTGGIPMSLTNVSSLQVLDLSNNKLKGNIPVNGSFSLFTPISYQNNPDLIQPKNSPSPVSPTPPPASSGNSNTGAIAGGVAAGAALLFAAPAIALAYWRRRKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVATDNFSNKHILGRGGFGKVYKGRLADGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMANGSVASCLRERQESQPPLGWPERKRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKDRKLETLVDADLQGNYIDEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAEKWEQWQKDETFRQDFNNNIHHPNANWIVDSTSHIQADELSGPR | 616 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun6g03099 | 616 | ProSiteProfiles | Protein kinase domain profile. | 292 | 576 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun6g03099 | 616 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 415 | 427 | IPR008271 | GO:0004672|GO:0006468 | |
Viun6g03099 | 616 | CDD | STK_BAK1_like | 298 | 569 | - | - | |
Viun6g03099 | 616 | FunFam | Somatic embryogenesis receptor-like kinase 1 | 369 | 586 | - | - | |
Viun6g03099 | 616 | Pfam | Leucine rich repeat N-terminal domain | 29 | 68 | IPR013210 | - | |
Viun6g03099 | 616 | Gene3D | Phosphorylase Kinase; domain 1 | 261 | 368 | - | - | |
Viun6g03099 | 616 | SUPERFAMILY | Protein kinase-like (PK-like) | 271 | 567 | IPR011009 | - | |
Viun6g03099 | 616 | SUPERFAMILY | L domain-like | 30 | 195 | - | - | |
Viun6g03099 | 616 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 9 | 577 | - | - | |
Viun6g03099 | 616 | Gene3D | Transferase(Phosphotransferase) domain 1 | 369 | 586 | - | - | |
Viun6g03099 | 616 | FunFam | Somatic embryogenesis receptor kinase 1 | 27 | 213 | - | - | |
Viun6g03099 | 616 | Gene3D | Ribonuclease Inhibitor | 27 | 211 | IPR032675 | - | |
Viun6g03099 | 616 | Pfam | Protein kinase domain | 293 | 564 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun6g03099 | 616 | ProSitePatterns | Protein kinases ATP-binding region signature. | 298 | 320 | IPR017441 | GO:0005524 | |
Viun6g03099 | 616 | FunFam | Somatic embryogenesis receptor kinase 1 | 261 | 368 | - | - | |
Viun6g03099 | 616 | Pfam | Leucine rich repeat | 95 | 155 | IPR001611 | GO:0005515 | |
Viun6g03099 | 616 | SMART | serkin_6 | 292 | 566 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun6g03099 | 616 | MobiDBLite | consensus disorder prediction | 201 | 226 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun6g03099 | Viun-Chr6 | 33373845 | 33381312 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun6g03099 | 1 | 616 | Receptor kinase-like Gene Family | AT4G33430 | 78.346 | 0.0 | 985 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-II | Viun6g03099 | Pkinase | 1.1e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun6g03099 | K13416 | - | gmx:100800522 | 1142.87 |