Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g03095 ATGAGTCAGCGTGTGGGTGACGAGGCTGTGACGAAGGCCATGGGAGAAATACGAAGTGGAGCATCTTCACGCAGACATGGAGATACTTTGCCACACATTCATAAAGTGGGATCTCCTCCGAAGCAGACACTTTTCCAAGAGATCAAAGATTCTGTGGCAGAGACTTTCTTCCATGACAAACCCTTACACAAATTTAAAGACCAATCCGGCTTTAGAATCTTTGTATTAGCCCTGCAATCTCTCTTCCCCATTTTTGAATGGGGGAAAGATTACACTTTTAAAAAATTCAGAGGTGATTTCATTTCTGGGCTCACTATTGCAAGTCTCTGCATCCCTCAGGACATTGCATACGCAAAGCTTGCTTATTTGGAACCACAATATGCACTGTACACAAGTTTCGTGGCTCCTCTTGTGTATGCTTTCATGGGAAGCTCAAGAGATATTGCAATTGGGCCAGTAGCGGTTGTGTCCCTCTTGCTTGGGACTACGCTGTCCGATGAAATCAGCGACATCCACAGCCATGATTACCTGCGTCTTGCATTCACTGCCACATTCTTTGCAGGAGTCACTCAAATGGCACTTGGTGTTCTTAGGCTTGGTTTCTTGATTGACTTTTTGTCTCATGCTGCCATTGTGGGATTCATGGCTGGAGCTGCCATTACAATTGCACTGCAACAGCTTAAGGGTTTTCTTGGCATAAAAGACTTCACTAAGAAAACTGATATTGTTTCTGTCATGCGCTCGGTGTTTCAATCAGCACACCACGGGTGGAATTGGGAGACAATAGTCATTGGAATATCATTCTTGATTTTCCTTCTTGTAACCAAGTATATTGCTAAAAGGAATAAGAAACTCTTTTGGGTGGCTGCAATCTCTCCTATGATATCTGTCATAGTGTCTACCCTTTTTGTCTACATTACCAGGGCAGACAAGAAAGGAGTGGCGATTGTGAAACATGTTAAGAAGGGTGTGAATCCATCATCTGCCAGCGAGATTTTTTTCAGCGGAAAATATCTAGGCGCTGGTATTCGGATTGGTGTGGTAGCTGGTATGGTAGCTCTCACGGAAGCTGTAGCAATTGGGAGAACATTTGCTGCCATGAAAGACTATGCACTGGATGGCAACAAAGAAATGATGGCAATGGGAGCAATGAACATGGTTGGTTCTCTAACATCTTGCTATGTGGCAACAGGCTCATTTTCTCGGTCAGCAGTGAACTACATGGCCGGTTGTAAAACTGCAGTATCGAACATCGTTATGTCGATGGTTGTGTTATTGACTCTGCTACTCATTACGCCGCTATTTAAGTACACTCCAAATGCGGTGCTTGCTTCTATTATAATAGCTGCTGTGCTTGGCCTTGTGAACATTGAAGCCATTATTCTTTTATGGAAGATTGACAAGTTCGATTTTGTTGCTTGCATTGGAGCCTTGTTTGGTGTGATCTTCAAAAGTGTGGAGATTGGCCTTCTAATCGCGGTGGCTATATCTTTTGCTAAAATTCTCTTACAAGTGACAAGGCCAAGGGTTGCAGTATTAGGGAAGCTTTCAGGAACTAGTGTTTATAGGAACGTCCAGCAATACCCCAAAGCAGCTCAAATTAATGGCATGCTCATTGTCAGGGTTGACTCTGCAATCTACTTCTCAAACTCCAACTATATCAAGGAGAGAATTTTGAGATGGCTGAGTGATGAAGAAGCTCAAAGGACAGCAAGTGGATTGTCCAGAATAGAGTATGTCACTGTGGAGATGTCACCTGTTACTGATATTGACACAAGTGGCATCCATGCCTTTGAAGAGTTATACAAGAGTCTTCAGAAAAGAAAAGTCCAGCTTATCTTGGCAAACCCAGGACCAATTGTAATAGAGAAGCTCCATGCATCAAAGTTAACAGACTTAATCGGAGAAGATAAAATATTTCTAACAGTGGCTGATGCTGTTTCAACTTTTGGTCCAAAGGGTGAAGGAGAAGTATGA 1977 0.4299 MSQRVGDEAVTKAMGEIRSGASSRRHGDTLPHIHKVGSPPKQTLFQEIKDSVAETFFHDKPLHKFKDQSGFRIFVLALQSLFPIFEWGKDYTFKKFRGDFISGLTIASLCIPQDIAYAKLAYLEPQYALYTSFVAPLVYAFMGSSRDIAIGPVAVVSLLLGTTLSDEISDIHSHDYLRLAFTATFFAGVTQMALGVLRLGFLIDFLSHAAIVGFMAGAAITIALQQLKGFLGIKDFTKKTDIVSVMRSVFQSAHHGWNWETIVIGISFLIFLLVTKYIAKRNKKLFWVAAISPMISVIVSTLFVYITRADKKGVAIVKHVKKGVNPSSASEIFFSGKYLGAGIRIGVVAGMVALTEAVAIGRTFAAMKDYALDGNKEMMAMGAMNMVGSLTSCYVATGSFSRSAVNYMAGCKTAVSNIVMSMVVLLTLLLITPLFKYTPNAVLASIIIAAVLGLVNIEAIILLWKIDKFDFVACIGALFGVIFKSVEIGLLIAVAISFAKILLQVTRPRVAVLGKLSGTSVYRNVQQYPKAAQINGMLIVRVDSAIYFSNSNYIKERILRWLSDEEAQRTASGLSRIEYVTVEMSPVTDIDTSGIHAFEELYKSLQKRKVQLILANPGPIVIEKLHASKLTDLIGEDKIFLTVADAVSTFGPKGEGEV 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g03095 658 FunFam Sulfate transporter 31 507 653 - -
Viun6g03095 658 Gene3D STAS domain 507 651 IPR036513 -
Viun6g03095 658 Pfam STAS domain 528 646 IPR002645 -
Viun6g03095 658 ProSiteProfiles STAS domain profile. 527 650 IPR002645 -
Viun6g03095 658 Pfam Sulfate permease family 96 475 IPR011547 GO:0016020
Viun6g03095 658 SUPERFAMILY SpoIIaa-like 529 651 IPR036513 -
Viun6g03095 658 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
Viun6g03095 658 PANTHER SULFATE TRANSPORTER 43 648 IPR001902 GO:0016020|GO:0055085
Viun6g03095 658 NCBIfam sulfate permease 83 646 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g03095 Viun-Chr6 33331183 33334883 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g03095 22 658 Inorganic Solute Cotransporters AT1G22150 71.944 0.0 912
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g03095 K17470 - gmx:100784124 1124.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g03095 6 33331183 33334883 Viun6g03095 6 33331183 33334883 ECH