Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g03094 ATGAGTCAACGCGTGAGTGACGAGGGTGTGAGAAAGAAAATGGAGGAAATAAGAAGTGGGCATGGAGATACTTTTTCACACTTTCACAAGGTGGAATCTCCTCCTAAGCAGACACTTCTCCAAGAAATCAAACATTCTGTGGTTGAGACTTTCTTCCCAGACAAACCCTTAAACAAATTTAAAAACCAAACCGGCTTTAGAGTCTTTGTATTGGCCCTGCAATCTTTCTTCCCCATTTTCGAATGGGGCAGAGACTACAATCTTAAAAACTTCAGAGGTGATTTCATTTCTGGACTCACCATTGCAAGTCTTTGCATCCCTCAAGACATTGCATACGCAAAACTTGCAAATTTGGATCCCCAATATGCACTATACACTAGTTTTGTTACCCCTCTTGTATATGCTTTCATGGGAAGCTCAAGAGATATTGCCATTGGACCCGTATCTGTTGTGTCCCTCTTGCTTGGGACTACACTGTCCGATGAAATCAGCGACATCAAAAGTCACGAATACCTGCGCCTTGCGTTTACTGCCACCTTCTTCGCAGGAGTCACTCAAATGGCACTTGGTGTTCTCAGACTTGGTTTCTTGATTGACTTTCTTTCTCATGCTGCCGTTGTGGGATTCATGACTGGATCTGCCATTACAATTGCACTGCAACAGCTTAAGGGTTTGCTTGGCATAAAAAATTTCACTAAGAAAACTGATATTGTTTCTGTCATGCGCTCGGTTTTCAGTTCAGCACACCATGGGTGGAATTGGGAGACAATAGTCATCGGATTAGCATTCTTGGTTTTCCTTCTTGTAGCCAAGTATATTGGTAAAAAGAATAAGAAGCTCTTTTGGGTGGCTGCAATTTCCCCTATGATATCTGTCATAGTGTCAACCTTTTGTGTCTATATAACCAGAGCAGACAAGAAAGGCGTGGCAATTCTTAAACATGTCAAGAAGGGTGTGAATTCATCATCTGCTGGAGAGATTTTTTTCAGTGGAAAATACCTGGGTCCTGGTATTCGTGTTGGTGTAATAGCTGGTATGGTAGCACTCACGGAAGCTGTAGCGATTGGGAGAACATTTGCTGCCATGAAAGACTATCCACTTGATGGCAACCAAGAAATGATGGCAATAGGAGCAATGAACATCATTGGTTCTTTAACATCTTGTTATGTGTCTACTGGCGGTTTTTCTCGCACAGCAGTGAACAACATGGCCGGTTGTAAAACTGCAGTATCGAACATCGTTATGTCGATGGTTGTGTTATTGACTCTGCTACTTATTACGCCGCTATTTAAGTACACTCCAAATGCGGTGCTTGCTTCTATTATAATAGCTGCTGTGCTTGGGCTTGTGAACATTGAAGCTATTATTCTTTTATGGAAGATTGACAAGTTCGATTTTGTTGCTTGCATGGGAGCCCTCTTTGGTGTGGTGTTCATAAATGTTGAGATTGGCCTTCTAATTGCGGTGGCTATATCTTTTTCCAAAATCCTTTTACAAGTGACAAGACCAAGGACAGCAATATTAGGGAAGCTTCCTGGAACTACTGTTTATAGGAACGTCTGGCAATACCCCAAAGCAATCCAAATTGATGGCATGCTGATTGTCAGGGTTGACTCTGCAATCTACTTCTCAAACTCCAACTATATCAAGGACAGAATTTTGAGATGGCTGACTGATGAAGAAACCCAAAGGATAACAAGTGGATTGTCCAGAATAGAATATCTCACTGTTGAGATGTCACCTGTTACTGATATTGACACAAGTGGCATCCATGCTTGTGAAGAGTTATACAAGAGTCTTCAGAAAAGAAGAGTGCAGCTTATCTTGGCTAACCCAGGACCAATTGTGATACAGAAACTCCGTGCATCTAAGTTAACAGATGTCATTGGAGAAAATAACATATTTCCAACAGTGGCTGATGTTGTTTCAACTTTTGGTTCAAATGGTGAAGAATTATTATGA 1962 0.4144 MSQRVSDEGVRKKMEEIRSGHGDTFSHFHKVESPPKQTLLQEIKHSVVETFFPDKPLNKFKNQTGFRVFVLALQSFFPIFEWGRDYNLKNFRGDFISGLTIASLCIPQDIAYAKLANLDPQYALYTSFVTPLVYAFMGSSRDIAIGPVSVVSLLLGTTLSDEISDIKSHEYLRLAFTATFFAGVTQMALGVLRLGFLIDFLSHAAVVGFMTGSAITIALQQLKGLLGIKNFTKKTDIVSVMRSVFSSAHHGWNWETIVIGLAFLVFLLVAKYIGKKNKKLFWVAAISPMISVIVSTFCVYITRADKKGVAILKHVKKGVNSSSAGEIFFSGKYLGPGIRVGVIAGMVALTEAVAIGRTFAAMKDYPLDGNQEMMAIGAMNIIGSLTSCYVSTGGFSRTAVNNMAGCKTAVSNIVMSMVVLLTLLLITPLFKYTPNAVLASIIIAAVLGLVNIEAIILLWKIDKFDFVACMGALFGVVFINVEIGLLIAVAISFSKILLQVTRPRTAILGKLPGTTVYRNVWQYPKAIQIDGMLIVRVDSAIYFSNSNYIKDRILRWLTDEETQRITSGLSRIEYLTVEMSPVTDIDTSGIHACEELYKSLQKRRVQLILANPGPIVIQKLRASKLTDVIGENNIFPTVADVVSTFGSNGEELL 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g03094 653 ProSiteProfiles STAS domain profile. 522 645 IPR002645 -
Viun6g03094 653 Pfam Sulfate permease family 91 470 IPR011547 GO:0016020
Viun6g03094 653 FunFam Sulfate transporter 31 502 648 - -
Viun6g03094 653 PANTHER SULFATE TRANSPORTER 42 643 IPR001902 GO:0016020|GO:0055085
Viun6g03094 653 CDD STAS_SulP_like_sulfate_transporter 523 638 - -
Viun6g03094 653 Gene3D STAS domain 502 646 IPR036513 -
Viun6g03094 653 NCBIfam sulfate permease 78 640 IPR001902 GO:0016020|GO:0055085
Viun6g03094 653 SUPERFAMILY SpoIIaa-like 524 645 IPR036513 -
Viun6g03094 653 Pfam STAS domain 523 640 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g03094 Viun-Chr6 33322455 33326943 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g03094 1 644 Inorganic Solute Cotransporters AT1G22150 68.827 0.0 875
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g03094 K17470 - gmx:100784124 1066.22