Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g03093 ATGGATGTTCTCAGATTCACCTCAAACCTTAGCACCACTCAGATGCTTCCACTGTCAAAAAAACACCAAACACAACCACCTCGTACAAAGTTTTCCGTTTCATGCAGAGCCACAAAACAGAAACCATGTGCGGTGGAGGAGAACTTGTACAAGGTACTGAGTCTGAGTCCCATGAGTGCAACCACAGATGACATAAAGAAAGCGTACAGATCAATGGCTCTTCAGTACCACCCTGACGTGTGCCATGACGGTTCCAAGAAAGAGGAGTTGACGAGGATGTTTGTGCAACTCAACGAAGCCTACACCACGTTGTCGAACCCAGAGCTTCGAGCAGATTATGATTATGAGTTGGGTTTGAGAAGCAAGAAAAGTGTGGGTGATGAGAGTTGGAGATGTAGGTGGCAGGAGCAGGTGGTTGAGTTGAAGAGAAGGTCTCACACTCGTATGGCACAGAGGGAGGGATCGTGGGGCTCTAGAGTCAGAGCACGAAACATGAATTCAAATGAAACATATGAATGA 519 0.4682 MDVLRFTSNLSTTQMLPLSKKHQTQPPRTKFSVSCRATKQKPCAVEENLYKVLSLSPMSATTDDIKKAYRSMALQYHPDVCHDGSKKEELTRMFVQLNEAYTTLSNPELRADYDYELGLRSKKSVGDESWRCRWQEQVVELKRRSHTRMAQREGSWGSRVRARNMNSNETYE 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g03093 172 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 22 168 - -
Viun6g03093 172 PRINTS DnaJ domain signature 51 69 IPR001623 -
Viun6g03093 172 PRINTS DnaJ domain signature 89 109 IPR001623 -
Viun6g03093 172 PRINTS DnaJ domain signature 69 84 IPR001623 -
Viun6g03093 172 SUPERFAMILY Chaperone J-domain 38 113 IPR036869 -
Viun6g03093 172 Gene3D DnaJ domain 34 141 IPR036869 -
Viun6g03093 172 MobiDBLite consensus disorder prediction 143 172 - -
Viun6g03093 172 CDD DnaJ 48 106 IPR001623 -
Viun6g03093 172 SMART dnaj_3 47 109 IPR001623 -
Viun6g03093 172 ProSiteProfiles dnaJ domain profile. 48 117 IPR001623 -
Viun6g03093 172 Pfam DnaJ domain 48 114 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g03093 Viun-Chr6 33321110 33321884 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g03093 50 114 C2H2 Transcription Factor Family AT1G74250 43.284 2.58e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g03093 - - vum:124830030 275.404