Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g03092 ATGGATGTTCTAACAATAGCCTCAACCCTCAGCATTTCCAAACCATTTCAAACGCTTTCACTCCCAAACACACTCCAAACACCACGTCCTCCTCAAACGCGTTTCTCAGTCTCATGCAGAGCCACAAAGCAGCAGCAACAGGTACGAGGTGTGGAAGACAACTTGTACAAGATTCTAAGTTTGAGTCCGAACAGCGCCACCACCGACGACATAAAGAAAGCGTACAGATCAATGGCGCGTCAGTACCACCCCGATGTGTGCCACGATAGTTCGAGGAAAGAGGAGTTGACGAGGATGTTTGTGCAACTCAACGCGGCTTACACCACCTTGTCCAATCCGAGGCTTCGCGCGGAGTACGACTACGAATTGGGTTTGAGAAGCAGAATTAGCGTTGGTGACGAGAGTTGGAGAATGAGATGGGTGGAGCAACTCGCCGAGTTGAAGAGAAGATCTCACAGGCGTACGCAACGAAATCGTGGATCCTGGGGCACCAGAGTCAGAGCACAAACCATGAACTCAAATTAG 525 0.501 MDVLTIASTLSISKPFQTLSLPNTLQTPRPPQTRFSVSCRATKQQQQVRGVEDNLYKILSLSPNSATTDDIKKAYRSMARQYHPDVCHDSSRKEELTRMFVQLNAAYTTLSNPRLRAEYDYELGLRSRISVGDESWRMRWVEQLAELKRRSHRRTQRNRGSWGTRVRAQTMNSN 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g03092 174 Gene3D DnaJ domain 40 157 IPR036869 -
Viun6g03092 174 ProSiteProfiles dnaJ domain profile. 54 123 IPR001623 -
Viun6g03092 174 MobiDBLite consensus disorder prediction 151 174 - -
Viun6g03092 174 Pfam DnaJ domain 54 120 IPR001623 -
Viun6g03092 174 SMART dnaj_3 53 115 IPR001623 -
Viun6g03092 174 CDD DnaJ 54 112 IPR001623 -
Viun6g03092 174 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 33 173 - -
Viun6g03092 174 PRINTS DnaJ domain signature 75 90 IPR001623 -
Viun6g03092 174 PRINTS DnaJ domain signature 57 75 IPR001623 -
Viun6g03092 174 PRINTS DnaJ domain signature 95 115 IPR001623 -
Viun6g03092 174 SUPERFAMILY Chaperone J-domain 39 119 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g03092 Viun-Chr6 33312327 33313092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g03092 56 133 C2H2 Transcription Factor Family AT1G74250 37.500 4.19e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g03092 - - gmx:100783590 233.032