Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g03068 ATGGATTGTTTCTGTTGCTTCAATCAGGTGGTTGGAGGACGGTCTTCATGTAGCTCCGGCAAGGGCAGAAGCCATCTGTGGCCAGTTAAGTATGGTTTTAGCCTAGTTAAAGGGAAAGCAAACCACCCAATGGAGGACTATCATGTAGCAAAAATTGCCAAGTGCGGAGGGCAAGAGTTAGGACTTTTTGCTATATATGATGGACACTTGGGAGACAGTGTGCCTGCATATTTACAAAAGCATCTCTTTTCTAATATCTTGAAGGAGGAGGACTTCTGGACTGATCCTGCCAGTTCTATCATTAAAGCTTACGAGACAACAGATCAGGCCATTCTTTCTCACAGTTCTGATTTGGGGCGAGGAGGATCTACTGCAGTCACTGCAATTCTTATCAATAATCAGAACTTATGGGTCGCAAATGTTGGAGATTCTCGAGCAGTTTTGTCAAGGAAGGGGGTGGCCATTCAGATGACCGTTGATCATGAGCCAAATACTGAGAGGGGCTTCATCGAGAACAAAGGAGGCTTTGTCTCCAACATGCCAGGAGATGTTGCAAGAGTGAATGGGCAGCTTGCAGTTTCTCGAGCATTTGGAGACAAAAATCTAAAATCACACTTACGATCTGATCCTGATGTACATCATTTTGATATTAACTCAGATGCTGAGTTTTTGATACTTGCTAGTGATGGTCTTTGGAAGGTAATGGCAAATCAAGAGGCAGTTGATATTGCAAGAAGGATAAAAGATCCACAAAAGGCAGCAAAAAAGCTAGTTGCAGAGGCATTGGACAAAGACAGCAAGGATGATATTTCGTGCATTGTAGTTCGTTTCAAGGGTTGA 840 0.4333 MDCFCCFNQVVGGRSSCSSGKGRSHLWPVKYGFSLVKGKANHPMEDYHVAKIAKCGGQELGLFAIYDGHLGDSVPAYLQKHLFSNILKEEDFWTDPASSIIKAYETTDQAILSHSSDLGRGGSTAVTAILINNQNLWVANVGDSRAVLSRKGVAIQMTVDHEPNTERGFIENKGGFVSNMPGDVARVNGQLAVSRAFGDKNLKSHLRSDPDVHHFDINSDAEFLILASDGLWKVMANQEAVDIARRIKDPQKAAKKLVAEALDKDSKDDISCIVVRFKG 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g03068 279 Pfam Protein phosphatase 2C 39 270 IPR001932 -
Viun6g03068 279 SUPERFAMILY PP2C-like 23 278 IPR036457 -
Viun6g03068 279 PANTHER PROTEIN PHOSPHATASE 25 277 IPR015655 GO:0004722|GO:0006470
Viun6g03068 279 FunFam Probable protein phosphatase 2C 39 22 278 - -
Viun6g03068 279 CDD PP2Cc 29 277 IPR001932 -
Viun6g03068 279 SMART PP2C_SIG_2 44 277 IPR001932 -
Viun6g03068 279 Gene3D - 14 279 IPR036457 -
Viun6g03068 279 SMART PP2C_4 26 275 IPR001932 -
Viun6g03068 279 ProSiteProfiles PPM-type phosphatase domain profile. 30 277 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g03068 Viun-Chr6 33191606 33195057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g03068 1 278 PP2C-type Phosphatase Gene Family AT1G22280 70.035 3.29e-140 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g03068 K17506 - gmx:100787659 502.286