Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g03022 ATGGAGGGTCACGGAGGAGGGACAAGAGGGGAGGCGGAGCGGTGGCTATACACGGCGAACAAGGTTTTAAGCGCACGTGACTTGCACGGGGCTCGCTCATTTGCGATTCGAGCCCGAGAGTCCGACCCGAGATACGAGCCCACCCAGCTTCTTCTCACGGTTATCGATACCCTCATGGCCGGCGAGGCCCGGATCAACGACCACCTCGACTGGTACGCCATCCTCCAAGTCCTCCGTTACACTCAGAACATCGACTATATCGCCGCGCAGTACCGCCGCCTCGCCACCCAGCTCGACCCTCACCACAACCCGTTTGCCTTCGCCGCTCACGCGTTTACTCTCGTCAACGACGCCTGGTCCGTACTCTCCAACTCCACCAAGAAAGCCTACTACGACACCCAACTCAGACTCCTCACTCAACCCCCTCCCCCGCCTCCTCCTCCACCGCCGCCGCAACCTCCCGCTCCTCCGGTTACCTTTTTCCCGATTCAACCTCCGCAACCGAACTTAAACCCGAATCCGACTCCGACCCCGTACCAAGTCCCTCAGCGGGAGAAAAGCCCCAGGCCTTGGGTGGAGGTGGAGGTGCCGAGTCAGGAGGACAATGCGAGCGAGTTGACTCGGGAGACTGAGACCGGGAGCGAAGGGGCGAGTTTCTGGACCGCATGCCCTTATTGTTACGTTATGTACGAGTATCCGAAGGTGTACGTGGATTGTACGTTGCGGTGTCAGAGTTGTCGGAGGGGGTTTCATGCGGTGGTGGTACGGCCGCCGCCGGAAGATGGTCTTGGCTCGTTTAGCAGTTGGGGTTTTTTCCCCGTGGGGTTTTCTGGAGATTTTAGAGACATTAGCGGTTCTTCTTCGAAGTGGAACCCTTTTTCCCCTTTGATTCCTTGCGCTTTCAAAGGGGAGGAGCAGCAGGGTGGGAAGCAGCAGAAGGAGCCTTATGTTTTCTACGATGATGACGCGTCCGCGGAGTTCGCGGAGGGTTCCGACACGACGAAGGATGATTCCGATGATGATGATTGGCATGGCGGGAATCAGAAAGGGATGGCGACGGAGACAAAGAAGAGGACGAGGAAGAGGGGGAGGAAGAGAAGAAATGGTAGCGGTGGTGGTGTGAGGAGGGAACCGATTGAGAGGCCTAGGAGAGGGGTCCATAGTCATAGTGGTGGTGGTGGGGATGTTAATGAGAATGTGGAGAATGGTGAGGTTGCGGATGTTGATGGTGTTGCGGCGGCGGCGGCGCCAGATTCTGGTAAGAAGGGTGCGTTGGGTGGTTGTAGGAGGAGGAGTGAGAGGAACTTGGGGAAGTTGGATTTGAATGTGGAGTTCAGCAATGAGGTTGAGGAGTCTTTGCATGAAGTGGATGAAGGGAATGAAAATGGGAATGGGAATGCTGAGGATAATATTGAAGGGATTGGGTTTTTTGAGGGGCTGGACGAGTTCCTTAGTAGCTTGCCTATTCTGAATGCTGTTGCAGATGACAAGGTCAAGGGTCATTAG 1506 0.5604 MEGHGGGTRGEAERWLYTANKVLSARDLHGARSFAIRARESDPRYEPTQLLLTVIDTLMAGEARINDHLDWYAILQVLRYTQNIDYIAAQYRRLATQLDPHHNPFAFAAHAFTLVNDAWSVLSNSTKKAYYDTQLRLLTQPPPPPPPPPPPQPPAPPVTFFPIQPPQPNLNPNPTPTPYQVPQREKSPRPWVEVEVPSQEDNASELTRETETGSEGASFWTACPYCYVMYEYPKVYVDCTLRCQSCRRGFHAVVVRPPPEDGLGSFSSWGFFPVGFSGDFRDISGSSSKWNPFSPLIPCAFKGEEQQGGKQQKEPYVFYDDDASAEFAEGSDTTKDDSDDDDWHGGNQKGMATETKKRTRKRGRKRRNGSGGGVRREPIERPRRGVHSHSGGGGDVNENVENGEVADVDGVAAAAAPDSGKKGALGGCRRRSERNLGKLDLNVEFSNEVEESLHEVDEGNENGNGNAEDNIEGIGFFEGLDEFLSSLPILNAVADDKVKGH 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g03022 501 ProSiteProfiles dnaJ domain profile. 70 135 IPR001623 -
Viun6g03022 501 MobiDBLite consensus disorder prediction 355 369 - -
Viun6g03022 501 CDD DnaJ 70 124 IPR001623 -
Viun6g03022 501 MobiDBLite consensus disorder prediction 370 388 - -
Viun6g03022 501 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 368 - -
Viun6g03022 501 MobiDBLite consensus disorder prediction 328 428 - -
Viun6g03022 501 MobiDBLite consensus disorder prediction 328 354 - -
Viun6g03022 501 Pfam DnaJ domain 70 132 IPR001623 -
Viun6g03022 501 MobiDBLite consensus disorder prediction 449 470 - -
Viun6g03022 501 MobiDBLite consensus disorder prediction 137 213 - -
Viun6g03022 501 SUPERFAMILY Chaperone J-domain 64 136 IPR036869 -
Viun6g03022 501 Gene3D DnaJ domain 59 140 IPR036869 -
Viun6g03022 501 SMART dnaj_3 69 127 IPR001623 -
Viun6g03022 501 ProSitePatterns Nt-dnaJ domain signature. 112 131 IPR018253 -
Viun6g03022 501 MobiDBLite consensus disorder prediction 138 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g03022 Viun-Chr6 32961565 32963567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g03022 11 500 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 37.598 5.72e-88 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g03022 - - gmx:100778926 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g01708 3 11986700 11988598 Viun6g03022 6 32961565 32963567 PCT