Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02946 ATGTCTACAAAAATGAAGCCTATCTCAAGAAATTATTATCCTCTTGTTTTATTTGGGTCATTATTCTGTCTCTTTATGTCGAGTTTTGGTGCTGAAAGTGACATCTATTGCTTGCAAACAATCAAGAACATGGACACTTCTAATCTTTTATCTAGCTGGGATTTCGAGAGCAACACTGAGGGTGGCATATGCAGATTCAGCGGTGTTGAATGCAGCAGCAACTATGTGGAAGATAGAGTAATCAGTCTCTGGCTATTTAACATGGGGCTGAAGGGCCAGTTTCCTGGTTGCGTTGAAGATTTCACATGGTTGCAGACTCTGATCCTCTCACACAACGAGCTTTCTGGATATATCCCAAACGATATATCAGCCAAGCTGCCATATCTGACCACACTTGATCTCTCAAATAACTATTTCTCTGGTGAAATTCCAAAGGGTATTGCAAATTTGTCAGGCTTAATTACCCTTCTACTTGATGGCAACCAGTTAACAGGCCAAATCCCACAAGATCTTGGGTTGCTTCCCAGGCTGAGAAATTTTAGTGTTGCGAACAACTTGTTGGAAGGGTCAGTGCCCGTTTTTGTGAGCAATCTTAATGTGAGTTTGAGCTATGCAAATAATAGTGGACTCTGTGGGGGAATACTAGGAAACTGTGATGAGAGCTTGTTTGGTAGATCGTTCTGGTATAGTTTTATTGTTGGTTTTGCTTGTTCAGCTACTTCTGTTCTAGTATCTGTCATGTACTATTATCCAACTTGGACAGAATTCAAAAAGAGGAGGAGAAGTAACGCTATTCATCCCTTAATCAAGAAGCAGAACACTGAACATGAAGCTGAATTGCTTCCACTGGCCTTGCAAGAGCAAGGAAGCAAAGAGCTACCAATATTGTTGGAGAGATTTATTACTAGAATGAGCTTCATGGAATTATGCAAGGCAACTGATTACTTTTGCACAGATAACGTGTTGGGGATAGGAAAGACAGGGATTATGTACAAGGCAAAGGTATCCAAAAGCTGTTTTCTTGCAGTTAAGAGACTGTATGATGGTGATAAGTACAGGTGGAGATTCTTACTTGAAATAATGATTCCGGGAAGACACAGACACAGAAACATAGTTCCACTGCATGGATTCTGCATACAGAAACATGAAAGGGTTTTGGTGTATAAGTACATTTCTAATGGAAGACTCAGTGATTGGTTACAATCTGACGAGGGGCATCAACCGATAAAATTGGAATGGCCTGAGAGGATTCACATTGCACTTGGTCTTGCAAGAGGTTTATCTTGGCTCCACAAAACGTGCAACGTAGTCCACCTCAATTTAGATTCGGAGTGTGTCTTGCTGGACAAGAATTTTGAGCCAAAAATTTCCAATTTTGGCAAGGCAAAATTTGTAAACCAGACGGTTGAAGATCATGTGAGAATGAAATTGTTTTTGGTTGATGGAGTTGGAGTGAAGGGTGATGCTGAGAAGGATGTCTATGATTTTGGAATAATCCTTTTTGAACTTTTAACGGGGAAAAGACTAAGTCCATCGACTGATTCTTATGACAGCATTAATGGCCATTTGATGAAGTATATCAGTAAGAACTTGTTCACTGATCCTGCTGACTTTTATGACGCCATTGACGATTCTATAATTGGGAAGGGTTTTGATGATAAAATTCTTGGTCTTCTTGAAGTTGCATGTGACTGTGTTAAGACATCTTTAAAGCAAAGGCCAAGGATGGTTGACATGCACCAAACCATAAGAGCTATGTGGGAGGGCTACAAACCCTGCTTTCATTCTCAAAGTCTGAAACTGTCTATGGATTGTGCTGACCATATAACCTGTATCAGCAAAATTGAATAA 1851 0.4009 MSTKMKPISRNYYPLVLFGSLFCLFMSSFGAESDIYCLQTIKNMDTSNLLSSWDFESNTEGGICRFSGVECSSNYVEDRVISLWLFNMGLKGQFPGCVEDFTWLQTLILSHNELSGYIPNDISAKLPYLTTLDLSNNYFSGEIPKGIANLSGLITLLLDGNQLTGQIPQDLGLLPRLRNFSVANNLLEGSVPVFVSNLNVSLSYANNSGLCGGILGNCDESLFGRSFWYSFIVGFACSATSVLVSVMYYYPTWTEFKKRRRSNAIHPLIKKQNTEHEAELLPLALQEQGSKELPILLERFITRMSFMELCKATDYFCTDNVLGIGKTGIMYKAKVSKSCFLAVKRLYDGDKYRWRFLLEIMIPGRHRHRNIVPLHGFCIQKHERVLVYKYISNGRLSDWLQSDEGHQPIKLEWPERIHIALGLARGLSWLHKTCNVVHLNLDSECVLLDKNFEPKISNFGKAKFVNQTVEDHVRMKLFLVDGVGVKGDAEKDVYDFGIILFELLTGKRLSPSTDSYDSINGHLMKYISKNLFTDPADFYDAIDDSIIGKGFDDKILGLLEVACDCVKTSLKQRPRMVDMHQTIRAMWEGYKPCFHSQSLKLSMDCADHITCISKIE 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02946 616 Pfam Leucine rich repeat N-terminal domain 32 72 IPR013210 -
Viun6g02946 616 ProSiteProfiles Protein kinase domain profile. 316 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g02946 616 SUPERFAMILY Protein kinase-like (PK-like) 294 581 IPR011009 -
Viun6g02946 616 SUPERFAMILY L domain-like 62 223 - -
Viun6g02946 616 Gene3D Transferase(Phosphotransferase) domain 1 391 598 - -
Viun6g02946 616 Gene3D Phosphorylase Kinase; domain 1 283 390 - -
Viun6g02946 616 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 21 585 IPR046959 -
Viun6g02946 616 FunFam Nuclear pore complex protein NUP107 32 193 - -
Viun6g02946 616 Pfam Protein kinase domain 319 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g02946 616 Gene3D Ribonuclease Inhibitor 36 218 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02946 Viun-Chr6 32496010 32498295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02946 24 586 Receptor kinase-like Gene Family AT1G69990 34.321 1.90e-92 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Viun6g02946 Pkinase 8e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02946 - - vum:124831146 1016.91