Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02935 ATGTTTGAGGCTTGGCTTTCTCTCAAGAAGACCCTTCAGTGCAAACCACACCCGAATCATGTTCATGATCCAAAGACTATTAGGCAGCAAAAAGGTAACCAGAGAACAAAGTTGGGCAATCTTGAGAATTCAAATACCAAAGATTTCATCCAAGGAAGCAAGAGGCACTCCAAAAATCCCCTAAGTTTCAAAGGGGACATTGAGATCACTGGTCCCATAATCGACGAAATTACTCTTGATAGCTCAAACCATGAAACTAGTCGACGTTTTCCTTGTCCTCAAAGCAATAGCAGCAATAAAGCTTCTCGCAGAACACGAAGGTCAGAGACATCTTCAAGGATAGCATATCCTCTAGATCACAATGAAGCAAATGTGCCCTCCAACACAAGAACGTTGGTTCAGATGGATTCTGATGTTTTTTCATCATTGACATGTGATAAATGTGGCGAGAAATTAAAAAACCCTGTTGCTGTAGAAGCACACAATGTCTCCAATCATTCAGTGATTGAGCTTGAGGAAGATTCGTCGAGACAGATCATAGAAACAATATGTGGAACAAGCTCGGTTTACTCCGAAAGCATGTTGGGTGAGATTGACTGCATCTTAAAGGTTGTGAATATACCAAAAACCTTTGCTTGCTTTGAGGAGTACAGAGAAAAGGTGAAGGAAAAGGCCGAGAAACAAAAGAAGAAACACCCTCGTTGTGTGGCTGATGGAAACGAACTTTTAAGGTTCCACGGCACAACCATTGCATGCTCTCTGGGCATAAACAGCTGTTACAGGCTGTGCACTTTAGACTATTGTGGTATATGTCAAATTCTGAGACACGGGTTCTCGAGCAACAAGGAATTCAAAGGTGCATTGGGGGTTTACACAACTTCCACAAGTGGGAAAGCCTTTGAATCCATTTCCATTATGACATCCCATGAGAGACCATTTTCGAGAAAATCCATCATAGTGTGCAGAGTAATAGCTGGGAGAATTTGTAGCCCTCTTGAAGGAATTGAAGAAAGGGCTGATTCAGAGTTTGATTCGTTGGCAGAAAAAATAAATGGGCATTCAGATGTTGAGGAACTGTACGTGCTAAATCCCAGAGCCCTTCTACCTTGCTTTGTGGTAATCTACAAACAGCAAACAGCAAAGTTTAGAAGGGTTGGGCCAAGCTTAAGGATAGGTAGCTTTTAA 1185 0.4194 MFEAWLSLKKTLQCKPHPNHVHDPKTIRQQKGNQRTKLGNLENSNTKDFIQGSKRHSKNPLSFKGDIEITGPIIDEITLDSSNHETSRRFPCPQSNSSNKASRRTRRSETSSRIAYPLDHNEANVPSNTRTLVQMDSDVFSSLTCDKCGEKLKNPVAVEAHNVSNHSVIELEEDSSRQIIETICGTSSVYSESMLGEIDCILKVVNIPKTFACFEEYREKVKEKAEKQKKKHPRCVADGNELLRFHGTTIACSLGINSCYRLCTLDYCGICQILRHGFSSNKEFKGALGVYTTSTSGKAFESISIMTSHERPFSRKSIIVCRVIAGRICSPLEGIEERADSEFDSLAEKINGHSDVEELYVLNPRALLPCFVVIYKQQTAKFRRVGPSLRIGSF 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02935 394 ProSitePatterns Zinc finger C2H2 type domain signature. 145 166 IPR013087 -
Viun6g02935 394 Gene3D - 160 381 - -
Viun6g02935 394 SUPERFAMILY ADP-ribosylation 233 378 - -
Viun6g02935 394 MobiDBLite consensus disorder prediction 16 30 - -
Viun6g02935 394 MobiDBLite consensus disorder prediction 16 64 - -
Viun6g02935 394 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 5 375 - -
Viun6g02935 394 MobiDBLite consensus disorder prediction 82 101 - -
Viun6g02935 394 MobiDBLite consensus disorder prediction 31 48 - -
Viun6g02935 394 MobiDBLite consensus disorder prediction 82 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02935 Viun-Chr6 32458121 32459907 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02935 4 376 C2H2 Transcription Factor Family AT5G54630 41.871 3.48e-94 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02935 - - gmx:100807216 582.408