Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02925 ATGGCTGAGGAGTTTCAAGCTGCTATTTGTGGTGAAAGTTGGTGGAATATTAATTCAACAAGAAGTGTGTTCCCTCTCATGTCATCAACATGTTCCGTGGCAGCAGCTGATGCAGGAAACTACAGCACTTGGCAAAGCACTGATTTCGTGGATTTGAAAGGAACGAGGTCTTGCGCTGAGGACATTAATAACTTCATTTCTTCTGATAATTCTCTGAGTTTTCTTGATGTTGAGAAGCCCCAGCAGAGGGACTCGGCTGGTGAAACTGGTAGCATCCTCACCGATTCCACCTTACAAATGATAGGTTTTGGCATGTCATCTTCAACTTCATCGAATTGGAATCAATCTTTATTAGGGAGCGATTTTCATTCTGTGCTTCAAGGAGAAACAGGCATGGATGGCGGTTCTTCCCATGATTCACAAATCCAGAAGGATTGGAATCCAAAGAATTTCTCATCTGCTGGTGGCCAAGGTTCCACCGTTGATGCTTTCAAGTCAATGAACCAAGAATTTTCCTTGGATCAGCAAAGTCTGAATTCCGTTGTCACAAGCACCGGATCATTATCTGGTGGTTTTCCAGTTGTTTCAGCCTCCTATGGTTACCCTTCAACCTTGATACAAGGCTTATACGACCCTGAGCCTCAACCACAACCACAGAACTCACTTTTCACCAACCCCCCCATGTCCTATTCTTCATCTACCGCAAACTATGGGACATGTTCCAATGAACTGTCACCAACTTGGTCCAAAATCTCTTCACTTCTCAAGCCCTCAACGCCAAAACAGCAGCTTAGTGGATTGCACTTTTCCAACAACACTTCTTTCTGGAATGGTTCAGCCGAAGCACTTCATGACATAAGAGCAGGTGTTTTTGCTTCCTCACAGGCACAATATCAAACGCCAAAATTTGAAGAGAAATCCAACAGCCCCAATACTCTATTAAACAAGCTCAAGAGAGAAGAATCGCCAGACGCAACCTCATCTGCTAAGAAAAGTTCTTCTGAGCCTGCATTCAAGAGGCAAAGAATTGAGACTCCATCTCCATTACCAACTTTTAAGGTAAGGAAGGAAAAGCTAGGGGACCGCATCACTGCTCTTCAGCAATTGGTTTCACCTTTTGGAAAGACGGACACAGCATCCGTTCTTCACGAAGCCATCGAGTACATCAAGTTCCTTCATGACCAAGTGTTAAGCACTCCATATATTAAAAATGGAGCTCCCATTCAACACCAGCAGGATTGTGATAATCTGAAGGAGTCAGAAGGGAGAAAACAAGATCTGAGAAGCCGAGGGCTGTGTTTAGTACCGATTTCGAGCACGTTCCCAGTGGCCAATGAGAGCAGTGTGGATTTCTGGACGCCAACATTCGGAGGTGCAGTGATTGGGAGGTAG 1392 0.4476 MAEEFQAAICGESWWNINSTRSVFPLMSSTCSVAAADAGNYSTWQSTDFVDLKGTRSCAEDINNFISSDNSLSFLDVEKPQQRDSAGETGSILTDSTLQMIGFGMSSSTSSNWNQSLLGSDFHSVLQGETGMDGGSSHDSQIQKDWNPKNFSSAGGQGSTVDAFKSMNQEFSLDQQSLNSVVTSTGSLSGGFPVVSASYGYPSTLIQGLYDPEPQPQPQNSLFTNPPMSYSSSTANYGTCSNELSPTWSKISSLLKPSTPKQQLSGLHFSNNTSFWNGSAEALHDIRAGVFASSQAQYQTPKFEEKSNSPNTLLNKLKREESPDATSSAKKSSSEPAFKRQRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVLSTPYIKNGAPIQHQQDCDNLKESEGRKQDLRSRGLCLVPISSTFPVANESSVDFWTPTFGGAVIGR 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02925 463 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 166 442 - -
Viun6g02925 463 CDD bHLH_AtbHLH_like 349 396 IPR045239 -
Viun6g02925 463 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 343 392 IPR011598 GO:0046983
Viun6g02925 463 MobiDBLite consensus disorder prediction 317 345 - -
Viun6g02925 463 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 353 398 IPR036638 GO:0046983
Viun6g02925 463 FunFam Transcription factor bHLH123 family 353 413 - -
Viun6g02925 463 Gene3D - 353 404 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02925 Viun-Chr6 32396624 32399853 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02925 1 458 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 37.945 1.53e-63 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02925 - - gmx:100794682 702.59