Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02919 ATGGATGGCAAGAAGAGTGATTCTAAAGGTTACATATGGCAGAGCTTTGATAATCCAACGGACACAATGATACCTGGGTTGATGTTGGGTTGGGATAAGAACTTAGGTATCGACAGATATTTGACTTCTTGGAAGAGTGCTAATGATCCCTCTCCTGGAAACTTTACCTTCAGATTTGACCAGATAGAATTTCCTGAGTTGGTAATCCGTCAGGGAATGAACATCACATTCAGAAGTGGAATTTGGGATGGCATCCGTTTTAATTCAGATGATTGGTTGTCATTTATTGGAATTACAGCCTTCAAGCCACAACTTTCAGTGAACAGCACTGTGGCAGTGTATTGGGATGAACCTGGAGATAGATTGTCAAGATATGTGATGAAGGATGATGGATTCCTTCAAAGATATATCTGGGACAACAAAAATTTGAAGTGGACTCTGATGCATGAGGGAAGAAAAGACTTTTGTGATAACTACGGAGCATGTGGGGTGAACGGTATTTGCAATATGAAGGATATTCCTGCTTACTGCGATTGCCTGAAAGGGTTTATACCAAATTCTCCGGAAGATTGGGATTCGTTTAACTGGTCTGGTGGGTGCATCAGGAGAACACCCTTAAACTGCACACAAAGTGATAGGTTTCAGAAACTAAGCTGGGTTAAACTACCCATGTTGTTGCAATTTTGGACTAATGAAAGCATGAATCTTGAAGAATGCAAGTTGGAGTGCTTGAAGAACTGTTCCTGCACGGCCTACGCAAATTCAGCCTTGAATGAAGGGCCTCATGGATGCTTGCTCTGGTTTGGGGACTTGACTGACATTCGGCAGCTTATAAATGAAGAGGGTGTACAACTTGATCTTTATTTAAGGTTAGCCGCTTCAGAAATAGAGTCCACTGCTAATGCACGTAAAAGGAGAAACATTGCTGTGATTATTTCGGTACCTGTGGCACTGCTGCTTTGTTGTATCATTTTCTACCTTTTCAAGAAGTATATAAAACGGAGGACAAGCACTGGTTTGGTCACAATCACAAGTCACAGAAATCACAACGAAGATCAAGCATCACCTATTTTTGATATAGATACTATTCTGGCTGCTACAAACAATTTTTCCATTGAGAACAAGATCGGGGAAGGTGGTTTTGGTCCAGTATACAGGGGTAAACTGGCTAACGGACAAGAAATAGCGGTGAAAAGGCTATCAAAAACCTCAAAACAAGGCATCTCAGAGTTTATGAATGAAGTTGGATTGGTAGCCAAACTCCAACACCGTAATCTTGTGAGTGTTTTAGGAGGGTGCACTCAAAGAGAGGAAAGAATGCTGATCTATGAATACATGCCAAATAGTAGCTTGGACCACTTCATTTTTGATCCTATACAAGGAAAATTTTTGAACTGGAGGAAACGATATGAAATTATCATTGGGATTGCTCGAGGACTACTTTATCTCCACCAAGATTCAAAACTAACCATCATTCATAGGGATCTAAAAACTAGTAACATTCTACTAGACAGCCAATTGAACCCCAAAATTTCTGATTTTGGTGTGGCCCGAATCGTTGAAGGAGATCATTCTTCAATTACAACAGAAGAGATTGCTGGGACAATTGGTTATATGCCCCATGAGTATGCAGTAAACGGGATTCTTTCCCTGAAGTCTGATGTATATAGCTTCGGAGTTATAGTGTTAGAGATACTAAGCGGGATCAGAAGTAGTCACTACAAAGTCAAGCATCCAGATCATGATCACAATCTGTTGGGGCAGGCATGGACATTATGGAAAGATGGACGTGCTGTGGGATTTATGGATGTTAATTTAGACCTTACAGTTGTTCCATCAGAATTACTAAGGTGCCTGCAAGTTGGTCTCTTGTGTGTTCAAAAGTTACCCGAAGATAGACCAACTATGTCTTCTGTGGTTTTTATGTTGAGCAATGAAAGCATTGCACTTCCCCTACCAAAGAAAACTGGCTTCTTTGAAGAAGAGTCAGAGTATCATCATGCGTACAGCGAGAATGAGAGTTTTAGTAACAATGCTATGACTATAACTCTATTAGAAGCTCGAAGTTAG 2070 0.4058 MDGKKSDSKGYIWQSFDNPTDTMIPGLMLGWDKNLGIDRYLTSWKSANDPSPGNFTFRFDQIEFPELVIRQGMNITFRSGIWDGIRFNSDDWLSFIGITAFKPQLSVNSTVAVYWDEPGDRLSRYVMKDDGFLQRYIWDNKNLKWTLMHEGRKDFCDNYGACGVNGICNMKDIPAYCDCLKGFIPNSPEDWDSFNWSGGCIRRTPLNCTQSDRFQKLSWVKLPMLLQFWTNESMNLEECKLECLKNCSCTAYANSALNEGPHGCLLWFGDLTDIRQLINEEGVQLDLYLRLAASEIESTANARKRRNIAVIISVPVALLLCCIIFYLFKKYIKRRTSTGLVTITSHRNHNEDQASPIFDIDTILAATNNFSIENKIGEGGFGPVYRGKLANGQEIAVKRLSKTSKQGISEFMNEVGLVAKLQHRNLVSVLGGCTQREERMLIYEYMPNSSLDHFIFDPIQGKFLNWRKRYEIIIGIARGLLYLHQDSKLTIIHRDLKTSNILLDSQLNPKISDFGVARIVEGDHSSITTEEIAGTIGYMPHEYAVNGILSLKSDVYSFGVIVLEILSGIRSSHYKVKHPDHDHNLLGQAWTLWKDGRAVGFMDVNLDLTVVPSELLRCLQVGLLCVQKLPEDRPTMSSVVFMLSNESIALPLPKKTGFFEEESEYHHAYSENESFSNNAMTITLLEARS 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02919 689 SUPERFAMILY alpha-D-mannose-specific plant lectins 7 50 IPR036426 -
Viun6g02919 689 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 333 445 - -
Viun6g02919 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 491 503 IPR008271 GO:0004672|GO:0006468
Viun6g02919 689 Pfam Protein tyrosine and serine/threonine kinase 371 640 IPR001245 GO:0004672|GO:0006468
Viun6g02919 689 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 7 634 - -
Viun6g02919 689 Gene3D Phosphorylase Kinase; domain 1 343 445 - -
Viun6g02919 689 Pfam PAN-like domain 208 274 IPR003609 -
Viun6g02919 689 Pfam D-mannose binding lectin 5 45 IPR001480 -
Viun6g02919 689 ProSiteProfiles PAN/Apple domain profile. 208 292 IPR003609 -
Viun6g02919 689 SMART ntp_6 209 291 IPR003609 -
Viun6g02919 689 Gene3D Transferase(Phosphotransferase) domain 1 446 650 - -
Viun6g02919 689 CDD PAN_AP_plant 204 292 - -
Viun6g02919 689 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 446 651 - -
Viun6g02919 689 ProSiteProfiles Protein kinase domain profile. 370 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g02919 689 SMART serkin_6 370 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g02919 689 SUPERFAMILY Protein kinase-like (PK-like) 353 643 IPR011009 -
Viun6g02919 689 Pfam S-locus glycoprotein domain 77 186 IPR000858 GO:0048544
Viun6g02919 689 CDD STKc_IRAK 376 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02919 Viun-Chr6 32365763 32370267 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02919 292 674 Receptor kinase-like Gene Family AT4G23190 46.354 8.83e-113 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun6g02919 PK_Tyr_Ser-Thr 6.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02919 - - vra:106774971 1342.79