Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02916 ATGCCAGGTTTAGTATTCTATCTCTTTTGGTTCTTCGCATCACACATCACAATTTCATTCTCCTCAGACACCCTAACACCAACACAAACTCTTCTAACCAACCAAACCCTGGTATCATCAAACCAAGTTTTCGCCCTGGGCTTCTTCTCCGGGACCAATTCCTCTTGCTACTTAGGCATATGGTACCACAACATCACTAACGGACCCGTAGTATGGGTTGCCAACAGAGACAACCCTCTCCACAACTCCACAGGATTTCTAACCATCGGAGAAAACAAAAACATGGTGCTCACAACTCCATCAGGGGAACCCGTTTGGTCCTCCAATATTACCAAAGCCAACAACCCCATTCTTCAGCTCTTGGACACGGGAAATCTAGTTCTCAGAGAGGAAAACGTAACCGACCCCACAAACTATCTCTGGCAAAGCTTCGATTACCCAACAGATACACTCTTACCTGGGATGAAAATGGGGTGGAACCTAGACACTGGCGTGGAGAAACACTTAACCTCGTGGAAGAGCGGAGGAAAAGACCCTTCAAGTGGAAATTACTCTTTTAAGATAGATCCTCGAGGGATACCGGAAATTTTCTTGAGGCGTGACGATAATATAATATATAGAAGTGGGCCTTGGAACGGTGAGAGATTCAGTGGGGTACCGGAGATGCAACCTGACACTGATTCCATTACGTTTAGTTTTTCCTACGATAAGCATGGTGTGTACTATTCCTTCTCCATTGAGGACCGTTCTATTTTGTCGAGGCTAGTTGTGACTTCGGGTGGTGCACTTGAGCGTCTTACTTGGGTGCCGAGCAGCAACACATGGACCAAGTTTTGGTTTGCACCTAAGGATCAGTGTGATAATTTCAAAGAGTGCGGTTCCTATGGTTTGTGTGACACCGACGCCTCGCCGGTTTGCACTTGTATGAGAGGGTTCAGTCCGAGGAACCAGCAGGCGTGGAATTTGAGAGACGGGTCTGATGGGTGTGTGAGGAACACGAATTTGGATTGTGGGAGTGACAGGTTTTTGCATGTGAAGGACGTGAAGTTGCCAGAGACAAGTATTGTGTTTGCGAACAGGAGCATGAACCTAGAAGAGTGTAAAGATTTGTGTCGCAGGAATTGTTCTTGCACTGCTTATGCCAACATTGAGGTCACAAACGGAGGAACCGGGTGTGTTACGTGGAGTGGTGAACTCATAGACATGAGGCAGTACGCACAGGGTGGACAAGATCTCTTTGTCAGAATAGCAGCTTCTGATGCAGAGGACACTGCAGATGGGTCTGAAAAGTCAAACCATATCGGCGAGATTGTAGGAATTACAATTTCTGCAGCTGTAGTAATTGTGGGACTGGTTGTGATTTACCGAAAGAAGAGCAAAGTGTTAAGTATATCGAATGTGAAGACTAACCCCAGAGGTTCTTTACAAAGTAGAGAATTGCTAACAAGTGACGGGGTATTTTCAACTAATAGAGAAACCTCTGGAGAAAGGAACATGGATGACATAGAGTTGCCAATGTTTGATTTTAATACCTTAGCAATGGCTACAAACAACTTCTCCGAAGCAAATAAACTTGGACAAGGAGGGTTTGGTATTGTTTACAGGGGAAGGTTGATGGAGGGCCGTGATATTGCTGTGAAGAGGTTATCAAAAAACTCCACGCAAGGAGTTGAAGAATTTAAGAATGAGGTAAAGTTAATTGTCAGACTTCAACATCGAAATCTTGTTCGGCTCTTTGGATGCTGCGTTGAGATGGATGAGAAGTTGCTAGTGTATGAGTATATGGAAAACAGAAGCCTTTATTCCGTTTTGTTTGACGAAGCCAAAAAAGCCATGTTGGACTGGAACATACGCTTCAACATTATATGTGGCATTGCTAGAGGGCTACTTTATCTGCACCATGATTCCAGACTCAGGATTATCCATAGGGATCTCAAGGCAAGCAATGTTCTACTTGACAGTGAATTGAACCCAAAGATATCAGATTTTGGGATGGCCAGACTTTTTGGCGCGAATCAGACAGAAGGAAACACACTGAGAGTTGTTGGAACATATGGTTACATGTCTCCTGAATATGCTATGGACGGGACCTTCTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTCTAGCCCTGGAAATTATAACTGGGAAAAAAAATAGAGGATTCTATTACTCAAATGATGACATGAATCTTCTAGGGCATGCATGGAGGCATTGGAGAGATGGCAGTGCATTGGAACTTGTTGATTCATCAATTGGTGATTCATATTCACCTTCTGAAGTTCTCAGATGCATACACGTTGGACTATTGTGTGTCCAAGAACGTGCAGAAGATAGGCCAACAATGTCTTCAGTGATGTTGATGCTGAGTAGTGAATCTTCATTAATGCCACAACCCAGAAACCCTGGATTTTCCTTAGGGAAGAATCCTGCGGAGATTGATTCTAGTTCAAGTAAGCAAGATGAATCATGGAGTGTGAACCAAGTCACAGTCACATTGCTAGATGCTAGGTAG 2517 0.4402 MPGLVFYLFWFFASHITISFSSDTLTPTQTLLTNQTLVSSNQVFALGFFSGTNSSCYLGIWYHNITNGPVVWVANRDNPLHNSTGFLTIGENKNMVLTTPSGEPVWSSNITKANNPILQLLDTGNLVLREENVTDPTNYLWQSFDYPTDTLLPGMKMGWNLDTGVEKHLTSWKSGGKDPSSGNYSFKIDPRGIPEIFLRRDDNIIYRSGPWNGERFSGVPEMQPDTDSITFSFSYDKHGVYYSFSIEDRSILSRLVVTSGGALERLTWVPSSNTWTKFWFAPKDQCDNFKECGSYGLCDTDASPVCTCMRGFSPRNQQAWNLRDGSDGCVRNTNLDCGSDRFLHVKDVKLPETSIVFANRSMNLEECKDLCRRNCSCTAYANIEVTNGGTGCVTWSGELIDMRQYAQGGQDLFVRIAASDAEDTADGSEKSNHIGEIVGITISAAVVIVGLVVIYRKKSKVLSISNVKTNPRGSLQSRELLTSDGVFSTNRETSGERNMDDIELPMFDFNTLAMATNNFSEANKLGQGGFGIVYRGRLMEGRDIAVKRLSKNSTQGVEEFKNEVKLIVRLQHRNLVRLFGCCVEMDEKLLVYEYMENRSLYSVLFDEAKKAMLDWNIRFNIICGIARGLLYLHHDSRLRIIHRDLKASNVLLDSELNPKISDFGMARLFGANQTEGNTLRVVGTYGYMSPEYAMDGTFSVKSDVFSFGVLALEIITGKKNRGFYYSNDDMNLLGHAWRHWRDGSALELVDSSIGDSYSPSEVLRCIHVGLLCVQERAEDRPTMSSVMLMLSSESSLMPQPRNPGFSLGKNPAEIDSSSSKQDESWSVNQVTVTLLDAR 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02916 838 CDD STKc_IRAK 525 790 - -
Viun6g02916 838 PIRSF SRK 1 838 IPR024171 GO:0004674
Viun6g02916 838 Gene3D Transferase(Phosphotransferase) domain 1 595 799 - -
Viun6g02916 838 CDD B_lectin 34 147 IPR001480 -
Viun6g02916 838 Gene3D Phosphorylase Kinase; domain 1 493 594 - -
Viun6g02916 838 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 7 781 - -
Viun6g02916 838 Gene3D Hepatocyte Growth Factor 334 414 - -
Viun6g02916 838 Pfam D-mannose binding lectin 70 173 IPR001480 -
Viun6g02916 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Viun6g02916 838 SUPERFAMILY alpha-D-mannose-specific plant lectins 56 212 IPR036426 -
Viun6g02916 838 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 144 - -
Viun6g02916 838 SUPERFAMILY Protein kinase-like (PK-like) 499 790 IPR011009 -
Viun6g02916 838 ProSitePatterns Protein kinases ATP-binding region signature. 525 547 IPR017441 GO:0005524
Viun6g02916 838 SMART ntp_6 337 416 IPR003609 -
Viun6g02916 838 MobiDBLite consensus disorder prediction 795 827 - -
Viun6g02916 838 Pfam Protein tyrosine and serine/threonine kinase 522 787 IPR001245 GO:0004672|GO:0006468
Viun6g02916 838 Pfam PAN-like domain 337 402 IPR003609 -
Viun6g02916 838 SMART serkin_6 519 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g02916 838 SMART blect_4 28 147 IPR001480 -
Viun6g02916 838 Pfam S-locus glycoprotein domain 206 315 IPR000858 GO:0048544
Viun6g02916 838 CDD PAN_AP_plant 333 417 - -
Viun6g02916 838 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 595 798 - -
Viun6g02916 838 Pfam Domain of unknown function (DUF3403) 792 838 IPR021820 GO:0004674
Viun6g02916 838 ProSiteProfiles Bulb-type lectin domain profile. 22 141 IPR001480 -
Viun6g02916 838 MobiDBLite consensus disorder prediction 811 827 - -
Viun6g02916 838 ProSiteProfiles Protein kinase domain profile. 519 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g02916 838 Gene3D - 17 144 IPR036426 -
Viun6g02916 838 ProSiteProfiles PAN/Apple domain profile. 337 417 IPR003609 -
Viun6g02916 838 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 485 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02916 Viun-Chr6 32360573 32365842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02916 507 838 Receptor kinase-like Gene Family AT4G11530 57.567 1.72e-131 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun6g02916 PK_Tyr_Ser-Thr 5.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02916 - - gmx:100797331 1398.26