Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02914 ATGGCGGCGATGTCCATCTCCGTCGTCTTTCTCTTCTCTTTCATCTCTCTCCACCATCTGTCTTCCTTGGCGGCAAGTTCAAAGATCAGTATCACGCAGGATGTCGTCATCAGGGACAGGGACCGTGAGACATTGGTGTCTGAAGAGCTCAACTTCACCATGGGTTTCTTCAATTTAGACAACTCCTCTTCCCGCTACGTCGGAATTTGGTACCACAACATTCCCGCGACACCTGTTATATGGGTCGCAAACGGCGACAACCCCATCAACGGCACAGGAGGATCCATAACTATTGCGAATGACGGGAACCTCGTGGTCCTCGATGGAGCCAGGAACCTTGTGTGGTCCACCCAAGTTTCCATCGATAGCAGCAGCAAAAACTGCTCAGCGATGCTTCGTGAAACTGGTAACCTCGTTCTCTCGTGCGACAGGAAAGACATGTGGCAAAGCTTTGAGAATCCAACGGATACATTCATGCCTGGTATGAGGGTTCCAGTGGGGGCTTCAACTGGGAAGAGTAGTGGCTATGTGTTCACTTCATGGAAATCATCAACGGATCCTTCGAAGGGAAACTACACTATGGGGGTGGATCCTAAAGGGTTACCTCAGATAGTGGTTTGGGAAGGAGACAAAAGAAGGTGGAGAACGGGGTATTGGGATGGTATAATGTTTGAAGGGGTGTCTATGGCAGGATATTATCTTTACGGTTTTACGCTGAATGGGGATGGTAAAGGAGGTAGGTATTTCATATATAACCCGTTAAACGGCACTGATATGGTGAGGTTTCAAATGGGGTGGGATGGCTATGAGAGAGAGTTCAGGTGGAATGAGGATGAGAAACGTTGGGATGTGGTTCAGAGAGGGCCTTCACATGAGTGTGAGGTTTACAACAAGTGTGGGAGTTTCGCGGCGTGTGATATGTCCCCTTCGAATTTACCTGTTTGTACTTGCATACGAGGTTTTGAACCGAAGAACAGGGATCAGTGGGATAAGGGGAACTGGTCGGGTGGGTGTACGAGGATGACTCCACTCAAGGCTCAGAGGACGAATGTTACATCCGCTGGCACTACTCAGGTTAGTGTCGGAGAGGATAAGTTCTTGGAGCGTACTTCTATGAGGTTGCCGGATTTCGCAAGTGTGGTTGGCACGAATGATTGTCAGAAAGTGTGTTTGAACGATGATTCTTGTACGGCGTATGCCAATGTTAATGGAATAGGGTGCATGGTGTGGAATGTGGATTTGGTTGACATTCAAGATTATGACAGTGGAGGAAATACACTGCATATCCGTCTCGCTCATTCTGAATTAGATGGAGGTAAAAAAAACATGATTGCGATAATATCTGCTGTTGTGGCGGGGTTAATCTGCCTAGGAATCTTTGTATGGCTGGTGTATAGATTCAAGGGAAAACTTAAAGTTTCCTCAGCTTCTTGTTGCAAGAATAGTGATGTGCTGCCAGTTTATGATGGAAGCAAGAGCAGAGACATGTCAGCGGAATTTTCAGGATCAGCTGACCATAGTTTGGAGGGGAGCCAACTAAGCGGGCCAGAATTTCCCCTTTTCAATTTCAGTTGCATTTCAATAGCCACAAACAATTTCTCAGAAGAAAATAAGCTTGGAAAAGGGGGCTTTGGCCCTGTCTACAAGGGAAAGCTTCCAGGCGGAGAACAAATAGCTGTTAAGAGGCTTTCAAGACGATCTGGTCAAGGCTTAGAGGAGTTCAAGAATGAAATGATGCTGATAGCAAAACTACAGCACCGAAATCTGGTTAGACTAATGGGTTGTTCTATTCAAGGGGAAGAGAAGTTGCTGGTATATGAATACATGCCAAACAAAAGCTTGGATTGTTTTTTATTTGATCCATTCAAACAAACACAACTAGATTGGACAAGACGGTTTGAAATCATTGAAGGCATTGCAAGAGGATTGCTCTACCTGCACCGAGATTCAAGACTTAGAATAATTCATCGAGATTTAAAAGCGAGTAACATTTTGTTGGATGAAAACATGAACCCAAAGATATCAGACTTTGGATTGGCTAGGATATTTGGTGGGAACCAGAATGAAGCCAATACAAACAGAGTAGTTGGTACATATGGTTATATGGCCCCTGAATATGCAATGGAAGGTCTGTTTTCAGTCAAATCGGATGTATATAGTTTTGGTGTGTTACTACTAGAAATTTTGAGTGGCCGCAGAAACACCAGTTTTCGTCACTCCGATGACTCCAGCCTCATAGGCTATGCGTGGCATCTTTGGAATGAACAGAGAGCAATGGAGCTAATCGATCCCTGCATTCGTGATTGTAGTCCTAAAAACAGAGCTTTGAGATGCATACACATAGGGATGTTATGTGTGCAAGATTCAGCAGCTCAGAGACCAAACATGTCTGCTGTGGTGTTGATGCTGGAAAGTGAAGCAACAACTCTCCCCACGCCAACGCAACCTTTGATTACTTCCATGAGGAGATCTGATGACAGACAGTTTTACATGGATGGCCTTGATGTTTCAAATGATTTGACAGTCACAATGGTGGTAGGGAGATAG 2547 0.4515 MAAMSISVVFLFSFISLHHLSSLAASSKISITQDVVIRDRDRETLVSEELNFTMGFFNLDNSSSRYVGIWYHNIPATPVIWVANGDNPINGTGGSITIANDGNLVVLDGARNLVWSTQVSIDSSSKNCSAMLRETGNLVLSCDRKDMWQSFENPTDTFMPGMRVPVGASTGKSSGYVFTSWKSSTDPSKGNYTMGVDPKGLPQIVVWEGDKRRWRTGYWDGIMFEGVSMAGYYLYGFTLNGDGKGGRYFIYNPLNGTDMVRFQMGWDGYEREFRWNEDEKRWDVVQRGPSHECEVYNKCGSFAACDMSPSNLPVCTCIRGFEPKNRDQWDKGNWSGGCTRMTPLKAQRTNVTSAGTTQVSVGEDKFLERTSMRLPDFASVVGTNDCQKVCLNDDSCTAYANVNGIGCMVWNVDLVDIQDYDSGGNTLHIRLAHSELDGGKKNMIAIISAVVAGLICLGIFVWLVYRFKGKLKVSSASCCKNSDVLPVYDGSKSRDMSAEFSGSADHSLEGSQLSGPEFPLFNFSCISIATNNFSEENKLGKGGFGPVYKGKLPGGEQIAVKRLSRRSGQGLEEFKNEMMLIAKLQHRNLVRLMGCSIQGEEKLLVYEYMPNKSLDCFLFDPFKQTQLDWTRRFEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLARIFGGNQNEANTNRVVGTYGYMAPEYAMEGLFSVKSDVYSFGVLLLEILSGRRNTSFRHSDDSSLIGYAWHLWNEQRAMELIDPCIRDCSPKNRALRCIHIGMLCVQDSAAQRPNMSAVVLMLESEATTLPTPTQPLITSMRRSDDRQFYMDGLDVSNDLTVTMVVGR 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02914 848 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 498 608 - -
Viun6g02914 848 PIRSF SRK 1 848 IPR024171 GO:0004674
Viun6g02914 848 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 19 794 - -
Viun6g02914 848 Pfam S-locus glycoprotein domain 214 325 IPR000858 GO:0048544
Viun6g02914 848 SMART serkin_6 533 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g02914 848 Gene3D - 29 151 IPR036426 -
Viun6g02914 848 Gene3D Transferase(Phosphotransferase) domain 1 609 813 - -
Viun6g02914 848 CDD B_lectin 43 154 IPR001480 -
Viun6g02914 848 ProSiteProfiles Protein kinase domain profile. 533 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g02914 848 SMART blect_4 36 154 IPR001480 -
Viun6g02914 848 Pfam D-mannose binding lectin 79 182 IPR001480 -
Viun6g02914 848 ProSiteProfiles PAN/Apple domain profile. 361 432 IPR003609 -
Viun6g02914 848 Pfam Protein tyrosine and serine/threonine kinase 536 801 IPR001245 GO:0004672|GO:0006468
Viun6g02914 848 SMART ntp_6 361 431 IPR003609 -
Viun6g02914 848 Pfam PAN-like domain 362 417 IPR003609 -
Viun6g02914 848 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 609 811 - -
Viun6g02914 848 CDD STKc_IRAK 539 804 - -
Viun6g02914 848 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 151 - -
Viun6g02914 848 SUPERFAMILY Protein kinase-like (PK-like) 518 832 IPR011009 -
Viun6g02914 848 CDD PAN_AP_plant 363 432 - -
Viun6g02914 848 ProSiteProfiles Bulb-type lectin domain profile. 20 153 IPR001480 -
Viun6g02914 848 Gene3D Phosphorylase Kinase; domain 1 509 608 - -
Viun6g02914 848 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 187 IPR036426 -
Viun6g02914 848 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02914 Viun-Chr6 32353495 32357481 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02914 436 816 Receptor kinase-like Gene Family AT4G23230 54.188 2.75e-134 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun6g02914 PK_Tyr_Ser-Thr 1.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02914 - - gmx:102660295 1441.02