Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02912 ATGCGATTCATTAGAAACATGTTACCTGTTTTTCTCATTCTGTTGTCGAACTTGTACATGATTTTTGGCGCCGCCATGGACACCCTTACAGTGTCAGACCCTGAAACCGTGACCTCTAATGACGGCGCATTCAAGCTAGGATTCTTCAGCCCTACAAACTCAACAAACCGGTATGTAGGGGTTTGGTATCTCACTGAATCCAATGTCATATGGGTGGCCAACAGAGACCGACCGCTAGAGGATTCTTCAGGGGTTGTCACCATATCTAATGACAGAAACCTTGTAGTATTAAATGGGAAAAAGCAAGTTGTTTGGTCATCAAATGTCTCAAACATTGAGTCCAATTGCACTGTGCAACTTCAAAATACTGGAAACCTTGTCTTGCTGGATAGCCTCACAGGCAAGACAATTTGGGAGAGCTTCAGACAACCCTCACACGCATTCCTCCCAAATATGATAATTAGCAACAACCAAGTGACGGGGAAGAAAGACAAAGTGACTTCATGGAAAAACCCTTCTGATCCAGCCGTTGGAATCTTCTCGGGCAGCCTCGACCGTCTAAGTGTTCCTGAAGTGTTTGTCTGGAATCAAACACAACCGTATTGGCGCTCAGGTCCATGGAATGGTCAGGGTTTTATTGGTTTGCCAAGGATGTATACTTCTGCGTATCTGAATGGATTCAGTGTTACAAGGGAAGATGACGGAACTGTCAGTATAATCTATACTTTGCCAAATCATTCTTTCTTTGGGACCATTTCCTTGACTTCAGAAGGCAGACTAGTTTACAGCTCTTGGATGAACAGACATCAAGTTGGGAAGCGAATGATTTACTACAGTAACTGTGATATTTATGGCTTCTGCGGTGCTTATGGAAGTTGTGATCCCAATAAGGTGCCAATATGCAACTGTTTGAGTGGTTTTGAGCCGAAAAACCGCGAGGAATGGGATAGGCAAAACTGGACAAGTGGATGTGTGAGAAGGGAAGCACTCAAGTGTGAGAGTAGTGAAGCCAGCACAGGAGATGGGTTTGAGAAATTGCAGATGTCTAAGGTGCCAGATTTTGCACTCCAATCATCTGTTTCTGTTGATACATGCAGAACAGAGTGCCTCAATAAATGCTCATGTACAGCATATGCATATGATGCTGGCATTGGCTGCATGTCTTGGAGGGGCGAGTTAATTGACATAGTAAGGTTCTCAAGTGGAGGACTTGATCTTTACATTCGCCAACCTCCTTCAGAACTCAATGGGGGGAGAAACATGACATCAATCATTGTAGCTACAGTGATAGTAGGAGCCCTTCTTTTCGCTATATGTGCATATTTTTTATGGAGATGGACTTCTAAGCGTTCTGCAGGAACGGAAAGATCACCATCATTGGTGCTGAGCATAAGGGAAACCCATCCAGAAAGCCAAATTGCAGGTCTCAGTGGAGAGCTGCAACAAGTTAAAATCCAGGACGTGCCAGTATTTAATTTTGAAAACATTGCAGCTTCAACAAATCACTTCAATTTAGCTAATAAGCTTGGCCAAGGTGGTTTTGGTGCGGTGTACAAGGGAGAATTAAAAAATGGGCAAGAAGTAGCAGTAAAAAGACTTTCAAAAGCATCTAGGCAGGGGACAGAAGAATTTATGAACGAAGTGACAGTAATTTCAAAACTTCAACACCGTAATCTTGTAAGACTCCTAGGTTGCTGTATTGAAGGAGGGGAGAGAATGCTGATATTCGAGTACATGCCGAATAAGAGTTTGGACTTTTATCTGTTTGATCCAGCCAAAAAGTCAGTTTTAGATTGGCAGAAAAGATTTAATATAATTGAAGGAGTCTCGAGAGGTTTGCTTTATCTCCATAGAGATTCTAGACTAAGGATAATACACAGAGACCTGAAGCCAAGTAATATCCTGTTGGATGGAGCACTGAATCCCAAAATATCAGATTTTGGTATGGCAAAAATCTTTGGGGGCAGCGAAGATGAGGCCAATACTAGAAGGGTTGTTGGAACATATGGCTACATGTCTCCTGAATATGCAATGCAAGGACTATTTTCAGAGAAATCAGATGTGTTCAGTTTTGGAGTTTTGCTGTTAGAGATCATCAGTGGCAGAAAAAATTCAAGTTTTGGAAACCAAGAGGAGGCACTGAGCCTCTTAGGATATGCATGGAAAGTATGGAATGAAGATGAGATTGAATCTCTGATTGATCCAGAAATATTGAATCCAGAGTATGTTGAACACATATTGAGATGCATACACATTGGACTTCTTTGTGTGCAAGAACTAGCTAAGGAGAGGCCTGCTATGGCCACTGTGTTGTCAATGCTAAATAGTGAGATTGTTAATTTTCCTCCTCCGCAACAACCAGCGTTCATCCAAAGACACACCGAGTTAAAAGGAGAATCGTCTCAGCGGAGTCACGAATCAAATTCCATCAACACTGTCACTGTCACAAACTTGCAAGGCAGATAG 2466 0.4238 MRFIRNMLPVFLILLSNLYMIFGAAMDTLTVSDPETVTSNDGAFKLGFFSPTNSTNRYVGVWYLTESNVIWVANRDRPLEDSSGVVTISNDRNLVVLNGKKQVVWSSNVSNIESNCTVQLQNTGNLVLLDSLTGKTIWESFRQPSHAFLPNMIISNNQVTGKKDKVTSWKNPSDPAVGIFSGSLDRLSVPEVFVWNQTQPYWRSGPWNGQGFIGLPRMYTSAYLNGFSVTREDDGTVSIIYTLPNHSFFGTISLTSEGRLVYSSWMNRHQVGKRMIYYSNCDIYGFCGAYGSCDPNKVPICNCLSGFEPKNREEWDRQNWTSGCVRREALKCESSEASTGDGFEKLQMSKVPDFALQSSVSVDTCRTECLNKCSCTAYAYDAGIGCMSWRGELIDIVRFSSGGLDLYIRQPPSELNGGRNMTSIIVATVIVGALLFAICAYFLWRWTSKRSAGTERSPSLVLSIRETHPESQIAGLSGELQQVKIQDVPVFNFENIAASTNHFNLANKLGQGGFGAVYKGELKNGQEVAVKRLSKASRQGTEEFMNEVTVISKLQHRNLVRLLGCCIEGGERMLIFEYMPNKSLDFYLFDPAKKSVLDWQKRFNIIEGVSRGLLYLHRDSRLRIIHRDLKPSNILLDGALNPKISDFGMAKIFGGSEDEANTRRVVGTYGYMSPEYAMQGLFSEKSDVFSFGVLLLEIISGRKNSSFGNQEEALSLLGYAWKVWNEDEIESLIDPEILNPEYVEHILRCIHIGLLCVQELAKERPAMATVLSMLNSEIVNFPPPQQPAFIQRHTELKGESSQRSHESNSINTVTVTNLQGR 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02912 821 Pfam PAN-like domain 337 396 IPR003609 -
Viun6g02912 821 SMART blect_4 28 144 IPR001480 -
Viun6g02912 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Viun6g02912 821 Pfam Domain of unknown function (DUF3403) 776 821 IPR021820 GO:0004674
Viun6g02912 821 CDD PAN_AP_plant 330 409 - -
Viun6g02912 821 MobiDBLite consensus disorder prediction 803 821 - -
Viun6g02912 821 SUPERFAMILY Protein kinase-like (PK-like) 488 811 IPR011009 -
Viun6g02912 821 CDD B_lectin 28 144 IPR001480 -
Viun6g02912 821 MobiDBLite consensus disorder prediction 795 821 - -
Viun6g02912 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 175 IPR036426 -
Viun6g02912 821 ProSiteProfiles Bulb-type lectin domain profile. 22 141 IPR001480 -
Viun6g02912 821 SMART ntp_6 338 410 IPR003609 -
Viun6g02912 821 ProSiteProfiles PAN/Apple domain profile. 332 411 IPR003609 -
Viun6g02912 821 PIRSF SRK 1 821 IPR024171 GO:0004674
Viun6g02912 821 Pfam S-locus glycoprotein domain 202 311 IPR000858 GO:0048544
Viun6g02912 821 ProSiteProfiles Protein kinase domain profile. 503 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g02912 821 SMART serkin_6 503 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun6g02912 821 FunFam receptor-like serine/threonine-protein kinase SD1-8 477 578 - -
Viun6g02912 821 ProSitePatterns Protein kinases ATP-binding region signature. 509 531 IPR017441 GO:0005524
Viun6g02912 821 Gene3D Transferase(Phosphotransferase) domain 1 579 780 - -
Viun6g02912 821 Pfam Protein tyrosine and serine/threonine kinase 504 772 IPR001245 GO:0004672|GO:0006468
Viun6g02912 821 Pfam D-mannose binding lectin 69 170 IPR001480 -
Viun6g02912 821 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 765 - -
Viun6g02912 821 Gene3D Phosphorylase Kinase; domain 1 478 578 - -
Viun6g02912 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 141 - -
Viun6g02912 821 CDD STKc_IRAK 509 775 - -
Viun6g02912 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 579 782 - -
Viun6g02912 821 Gene3D - 26 141 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02912 Viun-Chr6 32341090 32344835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02912 412 818 Receptor kinase-like Gene Family AT4G05200 50.122 4.15e-128 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun6g02912 PK_Tyr_Ser-Thr 3.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02912 - - gmx:112998788 1343.95