Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02902 ATGGAGTTTGATCTTGAAGACCCACTAGTCAGCTTGGGAGAAGAACAAAACTTTACTGTATCAGAACTCTTTGCCTCCGAATCAGATCACATGCCCTCCCCAAACTACTCAAGTCTAACACATTTTCACGTTTTCTCTTGTGAGGCCATATCTCTTATTCTTCAGGTTCAGCTTTCTTACAAACTGGACCCTTTTGTAGCTTACCTTGCTATGAATTACATGCACCGTTTCATGTCAAACCAGGAAATTCCGAAGGGGAAGCCGTGGTATCTTAGGCTTGTTGTCGTATCATGTCTCTCTCTTGCTTCAAAGATGAAAAACACAACTTTGCCATTTTTGGAAATGCAGAAAGAAGGTTGTAACTTTAAGGCTCAAAGTATTCAGAAAATGGAGCCTCTGATTCTCGGGGCACTGAAATGGCGTATGAGGTCAATTACACCTTTTTCTTTCCTGCGCTTCTTTATCTCTTTAGCTGAAATTGAAGACCAATCACTGAAGCAAGCACTCAAAGAGAGAGCTTCTACTATAATCTTCAATGCTCAAAATGAAATTAAGCTTTTAGAGTATAAGCCTTCAACTATTGCAGCAACTGCCCTTATCATTGCATCTCATGAACTACTCCCACATCAATATTCTATTCTGAGAGCTTCAATTATATCCAGTGAGTACCTAGATGAGGAGACATTGTCCAAGTGCTTTGATTTGATGCAAGAGATGATAAGAACGGTAGAAAAAGAGTTAGTGACAGAAACTCCAGGGAGTGTGCTTGAGAGAAACACCAAACGACAAAGAATTTAA 798 0.3985 MEFDLEDPLVSLGEEQNFTVSELFASESDHMPSPNYSSLTHFHVFSCEAISLILQVQLSYKLDPFVAYLAMNYMHRFMSNQEIPKGKPWYLRLVVVSCLSLASKMKNTTLPFLEMQKEGCNFKAQSIQKMEPLILGALKWRMRSITPFSFLRFFISLAEIEDQSLKQALKERASTIIFNAQNEIKLLEYKPSTIAATALIIASHELLPHQYSILRASIISSEYLDEETLSKCFDLMQEMIRTVEKELVTETPGSVLERNTKRQRI 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02902 265 CDD CYCLIN_AtCycD-like_rpt2 145 236 - -
Viun6g02902 265 PANTHER CYCLINS 46 241 IPR039361 -
Viun6g02902 265 SMART cyclin_7 149 238 IPR013763 -
Viun6g02902 265 SMART cyclin_7 51 136 IPR013763 -
Viun6g02902 265 Pfam Cyclin, C-terminal domain 145 241 IPR004367 -
Viun6g02902 265 FunFam D6-type cyclin 35 140 - -
Viun6g02902 265 SUPERFAMILY Cyclin-like 16 142 IPR036915 -
Viun6g02902 265 Pfam Cyclin, N-terminal domain 26 142 IPR006671 -
Viun6g02902 265 Gene3D - 22 234 - -
Viun6g02902 265 Gene3D - 33 143 - -
Viun6g02902 265 FunFam D6-type cyclin 141 234 - -
Viun6g02902 265 SUPERFAMILY Cyclin-like 126 246 IPR036915 -
Viun6g02902 265 SMART Cyclin_C_2 145 259 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02902 Viun-Chr6 32280188 32282018 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02902 1 258 Core Cell Cycle Gene Families AT4G03270 40.860 2.99e-58 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02902 K18812 - gmx:100799985 419.083