Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02901 ATGGACAACACAACCATGACACCATCAAATATGTCTGATAAATCCATAATTTGTTATACACCACTCTTGGTAACATCAAATGGATTATGGAAGAATAATAACCTTTTAGATTTCTCTCTTCCTCTATTTACCTTGCAATTAACGTTAGTTGTCTCTGCAACACGTTTCTTTGTTTTCATCCTCAGGCCTTTTCACCAACCTCGTGTAATTGCTGAAATCTTGGGTGGATTGCTTCTGGGTCCATCAGTGTTGGGAAGATATAACAATTTTGCCAGTATCGTGTTCCCTATGAAAAGTGTAATGCTGGTGGAAACAATGGCAAACATGGGTCTGATATACTTTGTGTTCCTAATTGGGTTAGAGATGGACATTTCGATCATCAAACGTTCTGGAAAGAAGACAGTGTTAATATCCCTTGCTGGCATGGTGGTGCCCTTTTTGGTTGCTATATGTTTATCCTCTTTAATATCTAACACAGACGAAAGCATAAATCAAGTCAGTTGTGTCCTCTATCTTGGTATTGTTCTATCTGTCACTGCATTCCCGGTGCTTGCTCGAATGCTTGTTGAGCTCAAACTTGTCAACACAGACTTAGGGAAGCTTGCTCTATCAACTTCTCTCATCAATGATGTCTGTGCATGGATGTTGTTGGCTATAGCTATTGCTGTATCAGAGGAAATAATTAGCGCTTGGGTATCATTGTGGGTTCTGCTATCAAACCTTGTTTTTCTTTCTTTCTCCTTTATCATTGTTAGACCAACAATGTTGTGGTTGATCGAGAAAACTCCAGAGGGAAAACCCTTCAGTGAGTTTCAACTATGCATTGTGCTCACTGGTGTGTTGATCTCGGCCTTCATCACGGATGTCCTTGGAACACATTGTATTTTTGGAGCTTTTGTGTATGGCCTGGTTATTCCAAAAGGGCCACTTGGAGCTGCAATAATAGAAAAGCTTGAAGACTTTGTTTCAGGACTTCTGCTTCCTCTTTTTTATGCCATTAGTGGGCTTAAGACAGATATCAACTTAATCAGCGGAGCTAGTACTTGGACTTTTATTCTCTCAGTGATTTCTCTGACTTTTCTCGGCAAGATTGCTGGGACTCTCCTTGTTTCAAACATGTTGCAGATACCAAATCGCGATGGAGTTGTTCTTGGTTTACTCATGAACGCTAAAGGCATTATTGAAATTATTGTGCTCAATGTTGGGAGGGATCAAAAGGTCTTGAATGATAAAATATTTTCAATTATGATCATTGTAATACTAATAATGACAGCATTGATTGCACCGGTTGTAACATTAATTTATAAGCCAAGAAAAAGGCTTGCACCTTATAAAAGGAGAACAATACAAAGTTCAAGACTTGATGGAGAGTTCAGAGTCCTTGTGGGTATTCACACCCCTCGAAATGTTCCCACACTGGTTAATCTCCTTGAAGCAACTTATCCCAACAAAAGGTCTCCAATGTGTGCTTATGTGCTGCACTTGGTTGAACTCACTGGTAGAGCTTCTGCCATGCTCATTGTCCATGCCAATAGACAATCAGGAGTTCCAGCCCTCAACAAAACACAAGCACAAACCGACCACATCATCACATCGTTTCAAAACTTTGAGGAACAGGTCAACTATGCTCAAGTCCAACCCTTAACAGCCATTTCCCCTTACTCCACCATGCATGAAGACGTATGCAATTTGGCTGAGGAGAAAAGGGTGTCCATCATCATTATTCCTTTCCACAAACAACAAACAGTTGATGGGGAAATGGAAGATACAATCCCAGCATTAAGAATGGTGAACCACAATCTACTACAAAACTCACCATGCTCAGTTGGTATACTTGTGGATAGGGGCTTCAACGGATCCAACCGTTTGATTGGAAATCTAGCATGTCATCAAGTGGCTGTGCTATATTTTGGAGGACCAGATGACAGAGAAGCATTAGCTTATGGATGGAGAATGTCAAGACATCCAAAGGTTCACCTTACTGTCATGCACTTCATTCCAACTCAGTATTCAAATCAAAGTTCAGAAACAGATCGCTTATGGGCCAAGCTTGATCGAAGTTTCACCACTATAAAAAATGGGGGAGAAAACCAACTAGACAATGAGTATATAAGCGAGTTCAAGCATGTGATTGCACATGATGATTCAGTGGATTACATAGCCAAGGTTGTGAACAATGGGGAGGAAACAGTTGCAGCAATAAGATCAATGAATAATGTGAATGACTTGTTCATAGTTGGGAGAGGACAAGGGACAATGTCACCACTAACAGATGGTCTTACAGATTGGAGTGAGTGTCCTGAATTAGGAGCCATTGGGGATTTACTAGCCTCTTCAGACTTTGAAACAACAGCTTCAGTGTTGGTTTTGCATCAGTATGTAGGGCAAGGACCAGATGGAGAGGACAATTTTGTTGTTGAAAGACCATGGGAATCAAGTGAACCTCGTCAAAGCATACAGCAACATCAAAGTCAACATATGCAGCAAAGATATGTAATGCCAATGGGAACAGGACACTCTCTTCTGTAA 2529 0.4069 MDNTTMTPSNMSDKSIICYTPLLVTSNGLWKNNNLLDFSLPLFTLQLTLVVSATRFFVFILRPFHQPRVIAEILGGLLLGPSVLGRYNNFASIVFPMKSVMLVETMANMGLIYFVFLIGLEMDISIIKRSGKKTVLISLAGMVVPFLVAICLSSLISNTDESINQVSCVLYLGIVLSVTAFPVLARMLVELKLVNTDLGKLALSTSLINDVCAWMLLAIAIAVSEEIISAWVSLWVLLSNLVFLSFSFIIVRPTMLWLIEKTPEGKPFSEFQLCIVLTGVLISAFITDVLGTHCIFGAFVYGLVIPKGPLGAAIIEKLEDFVSGLLLPLFYAISGLKTDINLISGASTWTFILSVISLTFLGKIAGTLLVSNMLQIPNRDGVVLGLLMNAKGIIEIIVLNVGRDQKVLNDKIFSIMIIVILIMTALIAPVVTLIYKPRKRLAPYKRRTIQSSRLDGEFRVLVGIHTPRNVPTLVNLLEATYPNKRSPMCAYVLHLVELTGRASAMLIVHANRQSGVPALNKTQAQTDHIITSFQNFEEQVNYAQVQPLTAISPYSTMHEDVCNLAEEKRVSIIIIPFHKQQTVDGEMEDTIPALRMVNHNLLQNSPCSVGILVDRGFNGSNRLIGNLACHQVAVLYFGGPDDREALAYGWRMSRHPKVHLTVMHFIPTQYSNQSSETDRLWAKLDRSFTTIKNGGENQLDNEYISEFKHVIAHDDSVDYIAKVVNNGEETVAAIRSMNNVNDLFIVGRGQGTMSPLTDGLTDWSECPELGAIGDLLASSDFETTASVLVLHQYVGQGPDGEDNFVVERPWESSEPRQSIQQHQSQHMQQRYVMPMGTGHSLL 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02901 842 PANTHER CATION/H + ANTIPORTER 15 794 - -
Viun6g02901 842 Pfam Sodium/hydrogen exchanger family 50 430 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Viun6g02901 842 Gene3D - 42 442 IPR038770 -
Viun6g02901 842 FunFam Cation/H(+) antiporter 15 42 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02901 Viun-Chr6 32274869 32278338 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02901 4 816 Antiporter Super Family AT2G13620 60.025 0.0 986
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02901 K26731 - gmx:100800514 1316.6