Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02870 ATGCAGACGAGGTACATGGAGACATCGAGCGGCGCTGCGAGAGGGAAACGCGGTTTAGATTCAGGTTCCACCGAAGAAGAACAACCTGAAAAAAAGCGACCTGCTCTCGCTAGCGTTATTGTTGAAGCCCTCAAGGTGGACAGTCTGCAGAAACTTTGTTCATCGCTGGAGCCTATTCTTCGTAGAGTTGTTAGCCAAGAAGTAGAGTGTGCTTTAGCAAAATTAGTCCCTGCCAAGCTTAGCGGAAGGACTTCTCCCAAGAGCATAGAAGGCCCTAATGACAGCAGTCTACAGTTACAATTCAGGAACAGGTTATCCCTTCCCCTCTTTACTGGTGGGAAAGTGGACGGAGAGCATGGCAGTGCCATACACATTGTTTTGATTGATACTATAACAGGCCATGTTGTTACATCTGGTCCAGCTTCGTGTGTCAAACTAGATGTTATTGTACTTGAAGGAGATTTCAATAACGAGGATGATGATAATTGGAGTGAAGAAGATTTTGATAGTCATGTAGTTAAAGAGCGGGAAGGAAAAAGACCTCTTCTGGCTGGTGATCTGCAAGTGACACTGAAGGAGGGTCTAGGAACATTGGGTGATCTTACATTTACAGACAACTCTAGTTGGATAAGGAGTAGGAAGTTCAGGCTGGGACTCAAAGTTTCCTCAGATTGTTATGAGGGAATGCGTATTCGTGAAGCCAAAACAGAGGCTTTTACTGTTAAGGATCATCGTGGAGAATTATACAAGAAGCATTACCCACCTGCCTTGAATGATGAGGTCTGGAGACTGGAGAAGATTGGAAAGGATGGTTCATTTCACAAAAGGTTAAATAAAGCAGGAGTATATACAGTTGAAGATGTCGTACGACTTGTGGTCAGAGATCCACAGAGACTGCGGAATATTCTCGGGAGTGGTATGTCAAATAAAATGTGGGATGTTCTTGTTGAGCATGCAAAGACTTGTGTTCTCAGTGGAAAACTCTATGTATATTATCCCGATGGTGCAAGGAATGTTGGTGTTGTTTTCAATAACATCTATGAGTTGAGTGGTCTAATTACCAATGAACAATATTACTCTGCTGATTCTCTCTCCGACAGTCAAAAGGTTTATGTGGACACACTGGTGAAGAAGGCATATGAGAATTGGATGCATGTTATTGAGTATGATGGCAAGTCTCTGCTAAATGCCAATCAGAATAAGACTTTGGGCACCTCCCAACCTCTGGCTGCAGGGGGTTCTCATGATTATTCAATTTCAAACTCCCTTGATCAGCAGACCTGCATCCCAAGTCTACCAGTTCCTGTAACTACTGGGCAGCCTTCAATGGATCCAGCCATAGCAGTCGGAGGTTATCATAATGTCGCGACTACCAGATCCTCAATGCAACAACAGAATGATAATCTTCATTCTTCAATTCAGTTTGATAACACTGTACTCCCACTGCAAAACCAGTTACTGAATGCTTCACACCAATCTCAACTTCCTAGAAATGAAACTGAGATGACTCTTGGTTCACGACAACCAGCTACTCCTGGCTTTCAGAGTGTCGGCATTTCAAATCCTGGTTATAGAGGATTTGAGGACTACTTTCCAGAGGAGGAGATTCGAACTAGAAGTCATGAGATGCTAGAAAATGAAGATATGCAACATTTGCTACGTATATTTAATATGGGAGGAGGGCAATCTCATGCTTCCTTCAATACCCCAGAAGATGCATACCCTTACCCATCATCTACTTACATGCCTGAGACCTCCATGAGCTACCAGTTAGATGATGAACGAAACCGTTCCTCGGGAAAGGCTGTTGTGGGCTGGCTTAAGCTTAAGGCAGCTTTGAGATGGGGCATTTTTATTCGGAAGAAGGCCGCTGAGAGACGAGCACAACTTGTTGAGTTGGATGACCCATAG 1911 0.4385 MQTRYMETSSGAARGKRGLDSGSTEEEQPEKKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSQEVECALAKLVPAKLSGRTSPKSIEGPNDSSLQLQFRNRLSLPLFTGGKVDGEHGSAIHIVLIDTITGHVVTSGPASCVKLDVIVLEGDFNNEDDDNWSEEDFDSHVVKEREGKRPLLAGDLQVTLKEGLGTLGDLTFTDNSSWIRSRKFRLGLKVSSDCYEGMRIREAKTEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGVYTVEDVVRLVVRDPQRLRNILGSGMSNKMWDVLVEHAKTCVLSGKLYVYYPDGARNVGVVFNNIYELSGLITNEQYYSADSLSDSQKVYVDTLVKKAYENWMHVIEYDGKSLLNANQNKTLGTSQPLAAGGSHDYSISNSLDQQTCIPSLPVPVTTGQPSMDPAIAVGGYHNVATTRSSMQQQNDNLHSSIQFDNTVLPLQNQLLNASHQSQLPRNETEMTLGSRQPATPGFQSVGISNPGYRGFEDYFPEEEIRTRSHEMLENEDMQHLLRIFNMGGGQSHASFNTPEDAYPYPSSTYMPETSMSYQLDDERNRSSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLVELDDP 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02870 636 MobiDBLite consensus disorder prediction 1 34 - -
Viun6g02870 636 Pfam Calmodulin binding protein-like N-terminal domain 97 244 IPR046831 -
Viun6g02870 636 MobiDBLite consensus disorder prediction 19 33 - -
Viun6g02870 636 Pfam Calmodulin binding protein central domain 256 322 IPR046830 -
Viun6g02870 636 PANTHER OS02G0177800 PROTEIN 14 549 IPR012416 GO:0005516
Viun6g02870 636 Pfam Calmodulin binding protein C-terminal domain 327 389 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02870 Viun-Chr6 32134622 32140034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02870 14 631 Calmodulin-binding Proteins AT5G57580 58.669 0.0 736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g01567 3 10490328 10497083 Viun6g02870 6 32134622 32140034 PCT