Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02829 ATGGACAATATCATCTGCACTTTAGTTTTTATACTTATTCTATCTTTGAAGCCTGCTACTGTTTGTTCTAGAGAGAGACAATGGAGAATGAGGTCTGGGGAGAATGATCTTATGCCTGATCTTGTAACAGACTTGCCTGGCCAACCTCATGTAGATTTTCAGCACTACGCTGGATATGTCACAGTCAGTGAAACCAGTGGAAGAGCACTCTTTTACTGGTTCTACGAGGCCATCACCAAACCTCAAGAAAAACCATTGGTTCTGTGGCTTAATGGAGGTCCTGGGTGTTCTTCTGTTGGATATGGAGCAACACAGGAGATTGGACCATTTTTAGTGGACACAGATGGCAAAAGCCTTATGTTTAATAACTTCACATGGAACAAAGAGGCCAACATGTTATTCCTGGAATCTCCTGTTGGGGTTGGCTTTTCCTATTCAAATACAACCACCGAATATGCACAATTGGGAGATGACTTCACAGCTAATGATGCTTACACTTTTCTGCACAATTGGTTCCTCAAATTTCCATTATATAGAACAAGGACATTCTACATAGCTGGAGAAAGCTATGCAGGAAAGTATGTACCGGAGCTGGCTGAACTCATCCAAGACAGAAACAATAAGGACCCTTCCCTTCACATTGATCTCAAGGGAATTATGCTGGGGAACCCAGAAACATCTGATGCTGAGGACTGGTCAGGAATGGTTGATTATGCTTGGAGCCATGCAGTGATATCTGATGAAACATACAAAACAATCAAAGCAAGCTGTGATTTCAATAGCAGTGACCCGTGGAGCAACAAAGATTGTAGTGAAGGGGTGGATGAAGTTCTCAAACAGTACAATGAAATTGATATCTACAGCCTCTACACCTCCACATGCTTCGCCAGTACAGCACGTTCAAACGATCCATCCATGCAAATGGTCATGCTTCGCTCATCTAAAATGATGCCAAGAATCATGGGTGGTTATGACCCATGTTTGGATGACTATGCTAAAACATTTTACAATAAACCAGAAGTTCAGAAGGCTCTCCATGCCAGTGATGGTCACAATCTCAGGAATTGGAGTATTTGCAATGACAGCATATTCAAGCGCTGGAAACAATCACAGACTTCTGTTATCCCAATCTACAAGAAGCTGATTTCAGCTGGACTTAAGATTTGGATTTACAGTGGAGACACTGATGGAAGGGTGCCAGTGCTGTCCACAAGATACAGCTTAAGCATTCTAGATTTGCCTATCACTAAGAAATGGAGGCCTTGGTATCATGAAAAGGAGGTAAGTGGGTGGTACCAGGAATACGAGGGGCTAACATTTGCGACATTTCGCGGAGCTGGCCATGCAGTGCCATGTTTCAAACCAAGCAACTCACTCGCATTCTTCTCCTCCTTTCTTCATGAACAATCACCACCCTCTACTAAATAA 1428 0.4286 MDNIICTLVFILILSLKPATVCSRERQWRMRSGENDLMPDLVTDLPGQPHVDFQHYAGYVTVSETSGRALFYWFYEAITKPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGKSLMFNNFTWNKEANMLFLESPVGVGFSYSNTTTEYAQLGDDFTANDAYTFLHNWFLKFPLYRTRTFYIAGESYAGKYVPELAELIQDRNNKDPSLHIDLKGIMLGNPETSDAEDWSGMVDYAWSHAVISDETYKTIKASCDFNSSDPWSNKDCSEGVDEVLKQYNEIDIYSLYTSTCFASTARSNDPSMQMVMLRSSKMMPRIMGGYDPCLDDYAKTFYNKPEVQKALHASDGHNLRNWSICNDSIFKRWKQSQTSVIPIYKKLISAGLKIWIYSGDTDGRVPVLSTRYSLSILDLPITKKWRPWYHEKEVSGWYQEYEGLTFATFRGAGHAVPCFKPSNSLAFFSSFLHEQSPPSTK 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02829 475 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 41 455 IPR001563 GO:0004185|GO:0006508
Viun6g02829 475 SUPERFAMILY alpha/beta-Hydrolases 40 469 IPR029058 -
Viun6g02829 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 196 IPR001563 GO:0004185|GO:0006508
Viun6g02829 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 135 145 IPR001563 GO:0004185|GO:0006508
Viun6g02829 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 438 451 IPR001563 GO:0004185|GO:0006508
Viun6g02829 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 134 IPR001563 GO:0004185|GO:0006508
Viun6g02829 475 FunFam Carboxypeptidase 374 468 - -
Viun6g02829 475 ProSitePatterns Serine carboxypeptidases, serine active site. 185 192 IPR018202 GO:0004185
Viun6g02829 475 FunFam Carboxypeptidase 37 296 - -
Viun6g02829 475 Gene3D - 327 365 - -
Viun6g02829 475 FunFam Carboxypeptidase 324 470 - -
Viun6g02829 475 Pfam Serine carboxypeptidase 47 467 IPR001563 GO:0004185|GO:0006508
Viun6g02829 475 Gene3D - 374 467 - -
Viun6g02829 475 Gene3D alpha/beta hydrolase 38 296 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02829 Viun-Chr6 31938637 31941734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02829 332 469 Calmodulin-binding Proteins AT2G22960 32.374 7.18e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02829 K16297 - gmx:100819700 861.677