Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02772 ATGGAGAACAACCCTAGTCCACCCCGAGTTGATAGAAAATTCATTGAGAGGAACAGAAGAAATCAAATGAAGACTCTCTTCCACAAACTCAACTCACTTGTGCCTCATCAAAAAAGATCAAAGGCGGTTTCACTGCCGGATCAGCTAGAAGAAGCGACAAACTACATAAAGAAATTACAGATGAATATGGAGAAAATGGAGAAGAAGAAGAACATGCTACTAGGAATAGAAAGGCCAAGTGTGAGAATGAATGGAGGAGGAGAGAAAGTAGGGTTTAAATCTCCACGGATTGAGATCCAACAAATGGGTTCAGCCTTAGTGGTTGTTCTAATAACTGGTTTGGATTCTCAGTTCATGTTCAGTGAAACCATTCGTGTTCTTCATGAAGAAGGAGTAGATATTGTTAACGCTAGTTATAATGTTATCGAAGATGCAGTTTTCCATTCAATACACTGCCAGGACCAGAAATCTGCGAACGGAGCTGCTAGGATATCTGAGAGGCTAAAGAACTTCATCTATGAGTCTAGCTACTGTGCTTTCTAA 543 0.4033 MENNPSPPRVDRKFIERNRRNQMKTLFHKLNSLVPHQKRSKAVSLPDQLEEATNYIKKLQMNMEKMEKKKNMLLGIERPSVRMNGGGEKVGFKSPRIEIQQMGSALVVVLITGLDSQFMFSETIRVLHEEGVDIVNASYNVIEDAVFHSIHCQDQKSANGAARISERLKNFIYESSYCAF 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02772 180 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 8 75 IPR036638 GO:0046983
Viun6g02772 180 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 9 173 - -
Viun6g02772 180 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 7 59 IPR011598 GO:0046983
Viun6g02772 180 SMART finulus 13 65 IPR011598 GO:0046983
Viun6g02772 180 Coils Coil 49 76 - -
Viun6g02772 180 FunFam Transcription factor bHLH162 1 85 - -
Viun6g02772 180 Gene3D - 2 81 IPR036638 GO:0046983
Viun6g02772 180 Pfam Helix-loop-helix DNA-binding domain 12 60 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02772 Viun-Chr6 31558016 31559149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02772 10 172 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 45.087 4.74e-44 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Viun6g02772 HLH 4.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02772 - - gmx:100814407 284.263