Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02764 ATGGATGAAAGTTGGAGTGAGGGAAAAAGGAGAATAAATTACAAGGAGGAAGAAGATGATGATGAGGAAGAGGAAGAGGAGGAGGGAAGTGAGTACGGAGAGGACGGTCGGAAGAAGAGGGTGGTGACTAACAAGAGAGGGTCCAAAGCTGGAGGCTCAATGCCACCTTTGTGTCAGGTTGATGGTTGTAATGCTGATCTCAGTGATGCTAAGCCCTACCACAGGCGTCACAAGGTTTGTGAGTACCATGCCAAGGCTCCTGCGGTGCTCATTGCAGAGCAGCATCAACGGTTTTGCCAACAATGCAGTAGGTTTCATGAGCTATCAGAATTTGATGAATCAAAAAGGAGTTGTAGAAGACGTTTGGCTGGACATAACGAGAGGCGTCGCAAGAATGCATCTGAATATGGACATTGA 417 0.4724 MDESWSEGKRRINYKEEEDDDEEEEEEEGSEYGEDGRKKRVVTNKRGSKAGGSMPPLCQVDGCNADLSDAKPYHRRHKVCEYHAKAPAVLIAEQHQRFCQQCSRFHELSEFDESKRSCRRRLAGHNERRRKNASEYGH 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02764 138 MobiDBLite consensus disorder prediction 17 31 - -
Viun6g02764 138 MobiDBLite consensus disorder prediction 118 138 - -
Viun6g02764 138 SUPERFAMILY SBT domain 56 135 IPR036893 GO:0003677|GO:0005634
Viun6g02764 138 FunFam Squamosa promoter-binding-like protein 14 49 119 - -
Viun6g02764 138 MobiDBLite consensus disorder prediction 1 59 - -
Viun6g02764 138 MobiDBLite consensus disorder prediction 1 16 - -
Viun6g02764 138 Pfam SBP domain 58 131 IPR004333 GO:0003677
Viun6g02764 138 PIRSF SBP 6 138 IPR017238 GO:0003677|GO:0003700|GO:0009908
Viun6g02764 138 ProSiteProfiles Zinc finger SBP-type profile. 55 132 IPR004333 GO:0003677
Viun6g02764 138 Gene3D - 48 119 IPR036893 GO:0003677|GO:0005634
Viun6g02764 138 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 22 133 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02764 Viun-Chr6 31473545 31475527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02764 42 135 SBP-box Gene Family AT1G53160 67.021 5.56e-41 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Viun6g02764 SBP 5.5e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02764 - - vra:106775516 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g02764 6 31473545 31475527 Viun6g02764 6 31473545 31475527 ECH
Viun5g02590 5 37091810 37093160 Viun6g02764 6 31473545 31475527 ECH