Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02761 ATGTCTCTCCCTGATTCTCCTGTGCCCGATAATATCGAGACCGATCCTTCTGAAGACGAGGAAGAAGTCGAAGAAGAAATAGAGGAGGAGGAAGCTGAAGAAGAAGTGGAAGAAGAGGAGATTGAGGAAGAAGTAGAAGAGGAAGATGTTGAAGAAGAGGTAGAGGAGGAAGAGGTTGAGGAAGTATATGAGGAAGAAGTGGAGGAGGAAGAGGTCGAGGAAGTAGAGGAGGAAGAGGAAGTGGAAGAGATGGAGTTAGAAGAAGAGGAAGAGGAAGAACAAGAAGTAGAGGAAGTGGAAGTAGAAGAAGAAGAAATAGAGGGAGAAGAAGTAGAAGAAGAAGAAGAAGAAGTAGAAGTTGAGGTAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAGGGAGAACAAGAAGTAGAAGAAGGGGAGGAAGAAGTCCAAGAGGAGGAAGGAGAAGAAGAGAAACAAGAACAAGCAGTGGAGAATAAGAAAGAAGAGCAACAACAGCAACAAAGAGAAGCAGTGGAGGAGAAGAAGGAAGAGCACCCACAACAACAAGAAAAAGTAACGAAGGAGAAGAAGGAAGAGCAACGACAGCAACCAGAAGAAGCAGTGGAGGAGAAGAAGAAAGAGCAAGAACAGCAACAAGAAGAAGCTGTGGAGGAGAAGAAGAAAGAGCAACAATTGCAACAAGAAGCAATGAAAGAGAAGGAGGGACAACAAAAAGGAGTAGAAGCAGTGGGGGAGGACAGATTGGCGTTGACAGGTTCTCCACCCGATGCTGATGAGGATTTGAGCGTACATATGGAGTCTAAGGAGCAAGACAAAAACTTGGGGCCAGATTATTCTGTGGCTGAAAACCCTGAAGTAATTCCACCATCTAGTGTGCATTGCATGGAAGAGAATGATGCCATGCTCAAAATATCTGTTCCTTCATGTGAGATACTGACATCGAAAAAGGAAGAGCTTCACCTGAAGTATGACATTTCAAGTCATTCGAAGTCAACAGAAAATCTGACTAATGTTGAAAATTGTAGAAGTCAAGGACTAGAAGTTGACGGTGAAAATGCTGGATCCCTTCTGCAGAAGGAAACACAAGATGGATACAGTGAGTTAGGTTGCAATAGCAAGGCTAGTTTATGTCATGATAATGATATTAATTCCAGGGTCAGGGACACCAAGTCATCTAGTGTCACTGGACAAGATATGGTCATTGGCCTCCTTCCAAAAGATTGTATTGTTGAGGATGCTAGTGGTGATCAGAATTCTAGGAACAATATCAAGCAGTTAGAGATGGAGTCAAGGGATGATATGAAGCAAACACTATCAAGCAGGACTAGAAGTATGTCTCCGAGTGCTGAGATTAAGAACAGAAACAAACGACCAAAAATTATATGTGACTTTTTTGCTAAGGGATGGTGTATCAGAGGTAGTTCTTGTAGCTTTCTTCATACAATAGATACTGTGGATAAGACAGATCAGGAGGCTGAAGCTGACTTAGTTACTACTCATCAGAAGAGAAAATTGAAAGTGGAAGAAGGTGTTAGGGAAAATGTTCAGAGAATAAGGATGAATGAGCAGGAACAAACTCCTAGTTGGCATCCATCTCAAGAAAAACAGAACTTTACGCCGAGGGACAACTTGTTTCCAGAGAATAGATTTGCATTTAGTTCAACAAGCAATTGTTTCAATCCAAAGCAGGATGGAATGGCTACTCTTCGGAACCAACATATGTACAAAGGATATGCTTCCACTCTTCTGAGCCATTCACCAAATTCAAGCCTGGTTACTCAATTTCCAGCTTCAAGTATGTCACTCTCTCAGCGGATTTCTTCTCAATCAGCATGTTCATTGCCTTTTAGTTCATCTCTGGGGGCTGGTAATCTGAACGCTCAAACGCTCACATCTAAGTCCACTTTCTCTGGTTCAGGGCGGGAAGATTTTCCTCTGGTTAGTTCTTCCAGCGTTCCATCTTATCCCACTGGATATAAATCAAAAATCTGTTCTTATGATTGGGAACCTTCTGTACCCTTCCGGCCATCCTTTTTTATTACTCCCATGAATGTATCATCTCCTGCAGATCTTTACGACCCTCTTCGAGATAGCATAGAGATACCTAATATAGGGGATGGGTCTTTGAAGGCTTCCCTTTTAATTCAAGGATCTAACGTACTGGCTTCATCACAGGCTCCAATATATGGTGATTCTGCTGGGATTGGGAAATACACGTCCAGTGTTAATGATGACAAAAGTTCTGTATCTTCTCATAATAAATTTTATGAAAATGAGCCAAACAAAAATTCTGTTCCTCATGAAAAAGATTATCTTCCAAATGAAACAGAGATAACGTCGGGAACTTATTCAAACTATCAAAATGGTAAAATTGGCACAGGACAAAATACCTTTGACGTTGCAGATAGTACTAAAAAGGAGAGAGAAATGACTGAACATGATGCTAGACGACATGGTGAAGGATCAGGGCATAAAACAAAGAGAGGAGACAGGGATAAGAAAAATCATGAAATAGATGTTGACTTTCAGATGGATGGCAGCATGCAGAAGGAACCAAAGGCACTAAAAATGTTACGTGCAGCTCTTGTTGATCACGTAAAAGAGTTGTTAAAACCAGTTTGGCATGAGGGTCGTCTTAGCAAGGATGCACATATTATGATAGTCAGAAAATCAGTTGACAAGGTTGTTAGCACCATAGAGCCCCATCAGATTCCTACCATAGATACTGCCAAGCAATATGTTTCTTCAAGTCGGGCAAAAATTGCAAAGCTGGTCAATGGATACGTCAACAAATATGGCAAATCTTGA 2814 0.4154 MSLPDSPVPDNIETDPSEDEEEVEEEIEEEEAEEEVEEEEIEEEVEEEDVEEEVEEEEVEEVYEEEVEEEEVEEVEEEEEVEEMELEEEEEEEQEVEEVEVEEEEIEGEEVEEEEEEVEVEVEEEEEEEEEEGEQEVEEGEEEVQEEEGEEEKQEQAVENKKEEQQQQQREAVEEKKEEHPQQQEKVTKEKKEEQRQQPEEAVEEKKKEQEQQQEEAVEEKKKEQQLQQEAMKEKEGQQKGVEAVGEDRLALTGSPPDADEDLSVHMESKEQDKNLGPDYSVAENPEVIPPSSVHCMEENDAMLKISVPSCEILTSKKEELHLKYDISSHSKSTENLTNVENCRSQGLEVDGENAGSLLQKETQDGYSELGCNSKASLCHDNDINSRVRDTKSSSVTGQDMVIGLLPKDCIVEDASGDQNSRNNIKQLEMESRDDMKQTLSSRTRSMSPSAEIKNRNKRPKIICDFFAKGWCIRGSSCSFLHTIDTVDKTDQEAEADLVTTHQKRKLKVEEGVRENVQRIRMNEQEQTPSWHPSQEKQNFTPRDNLFPENRFAFSSTSNCFNPKQDGMATLRNQHMYKGYASTLLSHSPNSSLVTQFPASSMSLSQRISSQSACSLPFSSSLGAGNLNAQTLTSKSTFSGSGREDFPLVSSSSVPSYPTGYKSKICSYDWEPSVPFRPSFFITPMNVSSPADLYDPLRDSIEIPNIGDGSLKASLLIQGSNVLASSQAPIYGDSAGIGKYTSSVNDDKSSVSSHNKFYENEPNKNSVPHEKDYLPNETEITSGTYSNYQNGKIGTGQNTFDVADSTKKEREMTEHDARRHGEGSGHKTKRGDRDKKNHEIDVDFQMDGSMQKEPKALKMLRAALVDHVKELLKPVWHEGRLSKDAHIMIVRKSVDKVVSTIEPHQIPTIDTAKQYVSSSRAKIAKLVNGYVNKYGKS 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02761 937 MobiDBLite consensus disorder prediction 12 153 - -
Viun6g02761 937 MobiDBLite consensus disorder prediction 803 838 - -
Viun6g02761 937 MobiDBLite consensus disorder prediction 261 277 - -
Viun6g02761 937 SUPERFAMILY CCCH zinc finger 458 483 IPR036855 GO:0046872
Viun6g02761 937 ProSiteProfiles Zinc finger C3H1-type profile. 458 485 IPR000571 GO:0046872
Viun6g02761 937 MobiDBLite consensus disorder prediction 154 243 - -
Viun6g02761 937 MobiDBLite consensus disorder prediction 743 762 - -
Viun6g02761 937 Gene3D - 450 539 - -
Viun6g02761 937 MobiDBLite consensus disorder prediction 777 802 - -
Viun6g02761 937 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 177 936 - -
Viun6g02761 937 MobiDBLite consensus disorder prediction 743 838 - -
Viun6g02761 937 MobiDBLite consensus disorder prediction 416 453 - -
Viun6g02761 937 Pfam Torus domain 436 497 IPR032297 -
Viun6g02761 937 MobiDBLite consensus disorder prediction 1 281 - -
Viun6g02761 937 Coils Coil 17 238 - -
Viun6g02761 937 SMART c3hfinal6 459 484 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02761 Viun-Chr6 31428450 31436987 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Viun6g02761 Torus 1.3e-07 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02761 - - vra:106775763 1247.26