Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02742 ATGGACTACTATAGGATTTTGGAGGTTGACAAGAATGTCTCAGAGGAAGAATTGAAGAAAGCCTACAGAAAGCTTGCAATGAAGTGGCACCCCGATAAGAACCCAACCAATAAAAAGGAGGCTGAGATTAGATTCAAACAGATATCTGAAGCCTACGAGGTTCTGAGTGATCCTCAGAAGAGAGAGGTTTATGATATGTATGGAGAAGGTGGGCTTAAAGGTGGAATGCCAACACGGGATGAAGGTATGGCTGGTATGGCTTCCTTCTTCCGAACCGGGGATGGCCCACAACCATTTAGGTTCAATCCCAGAAATGCAAACAACATTTTTGCAGAAGTGTTTGGGAGTTCAAACCCATTTGGGGGAATGGGGATGGGAAGGGGATTTGGGTGTGGTGGCAGAGGCATGAGGGGAGGATCGTGGGTATCAAGGTCTTTTGGTGGAATGTTTGGCAATGACATGTTCAGAGAAGGGAGGCCAATGAATGAAGCTCCACGCCGCAAGGCTTCTCCCATCCAAAATACACTGCTTTGCAGCCTTGAGGAACTCTACAAGGGGAGTACCAGAAAGATGAAAATCTCTAGAGAAATTGCACATGCTAGCGGGAGAGTTTTTCCTGTGGAGGAAATATTGAACATTGAAATCCAACCGGGATGGAAGAAGGGAACCAAAATCACTTTCCCAGAGAAAGGAAATGAGCAGCCAAATATTATTGCAGCTGATCTTGTGTTTATAATTGATGAGAAACCTCACAGTATATTTACAAGGGTTGGTAATGATTTGGTTGTGACACAAAAGATATCACCTACAGAAGCTGAAGCTCTACCAGGCTACACCATCCAACTTACAACTCTGGATGGCAGGGGTCTGAACATCGCCATAAACAACGCCACTGATCCAGATTACGAAGAAGTAGTCACCGGAGAAGGCATGCCAATTTCCAAAGATCCTTCAAAGAAGGGTAACCTTAGGATCAAATTCAACATCGAAATCCCAGACGTAGTCGGTGCCTGA 1014 0.4507 MDYYRILEVDKNVSEEELKKAYRKLAMKWHPDKNPTNKKEAEIRFKQISEAYEVLSDPQKREVYDMYGEGGLKGGMPTRDEGMAGMASFFRTGDGPQPFRFNPRNANNIFAEVFGSSNPFGGMGMGRGFGCGGRGMRGGSWVSRSFGGMFGNDMFREGRPMNEAPRRKASPIQNTLLCSLEELYKGSTRKMKISREIAHASGRVFPVEEILNIEIQPGWKKGTKITFPEKGNEQPNIIAADLVFIIDEKPHSIFTRVGNDLVVTQKISPTEAEALPGYTIQLTTLDGRGLNIAINNATDPDYEEVVTGEGMPISKDPSKKGNLRIKFNIEIPDVVGA 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02742 337 FunFam DnaJ subfamily B member 13 1 124 - -
Viun6g02742 337 FunFam Dnaj homolog subfamily b member 168 249 - -
Viun6g02742 337 Gene3D DnaJ domain 1 124 IPR036869 -
Viun6g02742 337 SUPERFAMILY HSP40/DnaJ peptide-binding domain 254 334 IPR008971 GO:0006457|GO:0051082
Viun6g02742 337 FunFam DnaJ subfamily B member 13 251 333 - -
Viun6g02742 337 SUPERFAMILY HSP40/DnaJ peptide-binding domain 166 262 IPR008971 GO:0006457|GO:0051082
Viun6g02742 337 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 333 - -
Viun6g02742 337 PRINTS DnaJ domain signature 60 79 IPR001623 -
Viun6g02742 337 PRINTS DnaJ domain signature 22 37 IPR001623 -
Viun6g02742 337 PRINTS DnaJ domain signature 40 60 IPR001623 -
Viun6g02742 337 PRINTS DnaJ domain signature 4 22 IPR001623 -
Viun6g02742 337 CDD DnaJ 2 57 IPR001623 -
Viun6g02742 337 Pfam DnaJ C terminal domain 173 332 IPR002939 -
Viun6g02742 337 Gene3D - 251 333 - -
Viun6g02742 337 Pfam DnaJ domain 2 65 IPR001623 -
Viun6g02742 337 Gene3D - 171 249 - -
Viun6g02742 337 ProSiteProfiles dnaJ domain profile. 2 68 IPR001623 -
Viun6g02742 337 SMART dnaj_3 1 60 IPR001623 -
Viun6g02742 337 CDD DnaJ_C 170 333 - -
Viun6g02742 337 ProSitePatterns Nt-dnaJ domain signature. 45 64 IPR018253 -
Viun6g02742 337 SUPERFAMILY Chaperone J-domain 1 90 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02742 Viun-Chr6 31330837 31333479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02742 3 67 C2H2 Transcription Factor Family AT1G74250 39.130 5.11e-09 55.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g02742 6 31330837 31333479 Viun6g02742 6 31330837 31333479 ECH