Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02741 ATGGAGGCGGAGGCAGAGAACAACGAGGTGAAGAGGGAAGAAAACAGCAATGACAACAACAACAACAATGAAAGTAACAGCAAATTTGGAAATTCGAGTGAGGGTCAGAGCAAGCCCAAGCGCCAAATGAAGACGCCGTTTCAGCTTGAAACGCTCGAGAAAGCTTATGCTGTGGAGAATTACCCGTCCGAGATGATGAGAGCAGAGTTGTCTGAGAAGTTGGGGTTGTCGGATCGGCAGTTGCAGATGTGGTTCTGTCACCGGCGGTTGAAGGACAAGAAGGACTTGCCGTTGAAAAAGCCGCGTAAGGCTGCGGCGTTAACTGATTCTCCGGTTGAGGAGCCCAAGCTAGCTTCTGAAGTGGGTGCTGAATACGGATCCGGGTCGGGTTCAGGGTCCAGTCCGTTTACCCGTTCGGAGTTGAGGAATGTGGTGCCTAGGGGGGGTTACTATGAGTCGCCACAGACTATAATGGAGCTTAGAGCAATTGCTTGTGTGGAGGCTCAGTTGGGGGAGCCTTTGAGGGAAGATGGACCTATTCTTGGAGTCGAGTTTGATCCCTTGCCACCAGATGCATTTGGGGCACCCTTAGCTGTTACAGATCCTCAAAAGCGGCCTAGTCTTGCCTATGACAATAAAATGTATGAAAGACATGATGTTAGGACAAATAAGGCAATAGCAAGGACATTCCATGAATATCCCTTTCTTCCAAGCCAGTCTGGCATTAGAGCTGATGTTTTTGGACAACTAAACCTGCCCCATTTACATGAACCAATGGAGGGTCCGGCAAGAACTCCTTTTCCCCTTGGAAATGAACAACCTAGAATTCATGCTCCTCAAAGTCATTCTTCTCGTGTTCGTCTTTTGTCTCAACCACAGGACAAGCAAGTGATTCCCTATCCATCTCCCCCTCGAGAAAATGATGTTGTACCCAAAAGGGAACCTCACATAAACATAACTAATACTGGAATGAACTCCCACTATACTACTGATCACCCAATTGTTGGACAAGAAATTCCATATGCTTTACCTGGTGGGCAAGTATCCCATAATGATGCAGTATTGAGGATGGAGAGGAAACGGAAGATTGATGAAGCCAGAGTTGCAAAGGAAGTTGAAGCTTATGAAATGAGGATGCGGAAAGAGCTTGAGAAACAAGATAACCTCAGACGAAAGAGTGAAGAGAGATTGAAGAAGGAAATGGAAAGGCAAGATCGTGAGAGAAGGAAGGAAGAAGAGAGGTTGTTGCGTGAGAAACAGCGAGAAGAGGAAAGATCAAAACGTGAGCAAAGGCGGGAAATGGAGCGTAGGGAAAAGTTTTTGTTGAAAGAACATTTGAGAGCTGAGAAAAGGAGGCAAAAAGAAGAGATCCGCAAAGAGAAGGAGGAAGAGAGGAGGAAAGCTGCACTTGAGAAGGCAAATGCTCGGAGAATAGCTAAAGAATCTATGGAGCTTATTGAGGATGAACAACTGGAATTGATGGAGTTGGCTGCTGCAAGCAAAGGGCTTTCCTCTATTATTCATATTGATCTTGATACTTTGCAGAACCTTGAATCATTTAGGGATTCATTGTGTGTATTTCCCCCCAAAAGTGTAAAGCTGAGAAAACCATTTGCTATCCAACCCTGGAGCAACTCAGAACAGAATGTTGGCAACCTTCTCATGGTTTGGAGATTCTTGATTACTTTTGCTGATGTTCTTGATTTATGGCCTTTTACTCTTGATGAGTTTGTACAGGCATTTCATGACTATGATTCTAGATTGTTGGGCGAGATACATGTGGCTCTTCTCAAGGTGATAATAAAGGACATTGAAGATGTTGCTAGGACACCTTCTACAGGATTGGGGATGAATCAAAACGGAGCTGCTAATCCTGGAGGTGGCCATCCAGAGATCGTGGAAGGAGCATATGCATGGGGCTTTGACATACGAAATTGGCAGAAGAACTTGAATCAGTTGACATGGCCAGAAATTTTCCGACAGTTAGCACTGTCTGCAGGATTAGGACCGCATCTGAAGAAAAGAAGTATTGCATGGTCATATGCAATTGATAAAGACGAGGGAAAAAGTTGTGTAGATATCATTTCTACACTTCGTAATGGTTCAGCAGCTGAAAGTGCTGTGGCCAAAATGCAAGAGAGAGGTCTATTAGCTCCCCGAAGATCAAGGCACCGGTTAACTCCTGGAACAGTTAAATTTGCAGCATTTCATGTTCTCTCATTGGAGGGTAGCAAGGGCTTGACAGTACTGGAGCTTGCAGAAAAAATTCAGAAATCTGGTCTTCGAGACCTAACGACCAGCAAGACTCCTGAAGCATCAATTTCTGTTGCTTTGACAAGAGACACTAAATTGTTTGAAAGAATAGCTCCATCAACATATTGTGTACGAGATGCATTCAGAAAAGATCCTGCTGATGCTGATTCCATTCTTTCAGAAGCAAGAAAGAAAATTCAGATATTTGAAAATGGGTTTCTAGCTGGTGAAGATGCTGATGATGTTGAAAGAGAAGAGGAGTCAGAAAGTGATGAAGTTGATGAGGATCCTGAAGATGATGATTTAGTGAATCCTTTGAGTGCAAACCAAAATTCTGAACAGTATGATGACACAAACATTTGCTCATCAAATGGAAAAGAAAATTTGGGTCACAACATAGATCTTATTCAAAATGAGTTTGATACAGATTTACCCTGTCTTCCTAAGAATGGTTCAACGGGTGCTGATTGTCCCAGTTCTGTCACTAGACCTGTTGCTTGTGGAGATTTAAATGCTGGGAATCTTGATCAAGATAATATGGAAATTGATGAAAGCATATCTGGAGAGTCCTGGATTCTAGGACTTGCAGAAGGAGAATATTCTGATCTCAGCGTAGAGGAGCGTCTAAATGCTCTTGTTGCTTTGGTTGGTGTGGCAAATGAAGGAAATTCAATCCGTGTTGTCCTTGAGGATCGACTGGAATCAGCAAATGCTCTGAAGAAACAAATGTGGGCAGATGCACAGATTGATAAAGTTCGTCTGAAAGATGATAATATTAGTAAATTAGACTTTCCATCTCTTACTGGAAATAAAGTTGAAACACAATACACATATCCAGCTGCGGAGGGACACCAAAGCCCAATAATGCTTGACATTAATATTAACGATAATGAAGCATCACCCAGCACTGCAGAGAACCAAAAGGGAGCTCCTGTTGCACTAAGCATGCCTATGGAGAAGTCCTCATCAATTCAAGATTTTGTCATTGGTACTGGTGCAGACATCCCTCAGACTCAAGTACCTGCACAATATTCCAAAAGGTCACGTTCACAGTTGAAATCTTATTTTGCCCACTTAGCGGAGGAGATGTATGTCTACAGGTCGTTACCCCTTGGCCAAGATCGCAGACGTAATCGATATTGGCAGTTTGTTGCATCTGCATCTAGCAGTGATCCTGGTTCTGGCAGGATTTTTGTTGAATGTCATGATGGCAAGTGGTGGCTCATTGATTCTGAAGAGGCCTTTGATTCTCTTTTGACATCATTGGATTCACGTGGGCTCAGGGAATCTCATTTGCGCTTAATGTTGCAAAAGATTGAGAATTCCTTTAAAGAAAACGTTCGTAAGAGGAATGCAGATTGTGCCAAAAATGGAAGCAAAGGCGAAGTTTCTATTAAAGTTGAAGCTAGTGAACCATTTTCCATCCCTGACCCCAATGCTGGATCTGACAGTCCTAGCAGTATCCTCCATAACTTGAACACTGATACATCTGAAGTTTCATCGTCCTTCAAAATTGAGCTTGGGAAAAGTGAAAGTGAGAAGAAAGCTGCCTTGAGAAGGTATCATGATTTTCAGAAGTGGTTGTGGAAAGAATGCTCTAATTCATCAGTTTTATGTGCAATGAAATATGGGATAAAGAGATGCAAACCTCAGATGGACATTTGTGATATCTGTCTCGATCTTTATTTTGTTGAAGACTCCCATTGCAGTTCCTGCCACCGGACCTTTTCCTCAAATAATGGATTTAATTTTTCTAAGCATGCATTTCAATGTCGAGACAAATTATCCAAAGATAATTGTATTTTGGAATACTCTCTTCCCTTGCGGACAAGATTGCTTAAGTTCCTGTTGGCTTGTATGGAGGTATCTGTTCTATCTGAAGCATTTGGAACAAATTGGACCGATGATATTAGGAAGCACTGGGGTGTAAAGTTGAGCAAATCATCTTCTGTTGAGGAACTTATACAGATATTGACCCTATTTGAGAAAGCACTACGGCGAGATTTTCTGTCATCTAACTTCTCTACAACAGATGAATTGTTGGGATCAAGCAGTATGTTAGAATGTTCTGGGCCGGCTTCAACTGATCCTGAATCTGTTCCTGTCCTTCCATGGGTTCCACTAACAACTGCTGCTTTGTCTCTCAGACTTTTTGAGATTGATTCATCCATCAGCTATGTAAAGCCCGAAAGACTAGAGCCTTCTGAGGAAAAAGAAGCAAGAGAATACATAAGGTTTCCATCAAGATATACTCACTTGAAATCTAATAGGGAGGTTGAACCAGCAGAATTCGACCATGATGAATTCACTAAAGATAAATCTGTTCCTAAGAAAATTGTACGAAGTGGCAATAAACGTAGTCGAGGGACTAATGAACAAGGACGGGGCAAAAAACTGGCTAAAAGAGTGTACAATTCCAAACGAGATGGTGGTCGGAAGAATGCTAAGGTCACTGTCAATCTAAGTCACAAACTAAAACAGCAGGCACGAGGAACACAAGGACAAGGTGCTGGGCGAGGTCGCCGAACGGTAAGAAAGCGGAGAGTGGGAAAGCGAGCTGTTGAAGATTTGTTGCTGGGCCATACAACAGCCAACCATAGCTCCAAGATTGATAGAGAACCACTGAAAAACTTGGATGAGGAATGGGATAGAGAAAAGGCAAGTCCCATGACTCCAGTGCACATTGGGGTTGCTGCTGACAATAGTAATAGTGCCGAAGAGGTAGAATCTGATTATGACCATGCTCAAGCTGTGGAATATGATCAAGGAAACTGGGAGGTAGGTTTTAACGGCGTTCCCCCCAACAGATGGAGTAGGGATTTGGTTGGAATGAGTGACGAAGATGTGGATGCTTCTGAAGACGACAATGACAATGGCATTGAAGAGAATGAAGATGAGGATTCAGAAGCGGATGTTATGAGTGAGGGTTCAGATGGGATGGGAAATAGGGTAGTAAACGTTGGAGGCTCATACTCAGCTTTGTCTGAAGATTCTTCAGATTAG 5256 0.429 MEAEAENNEVKREENSNDNNNNNESNSKFGNSSEGQSKPKRQMKTPFQLETLEKAYAVENYPSEMMRAELSEKLGLSDRQLQMWFCHRRLKDKKDLPLKKPRKAAALTDSPVEEPKLASEVGAEYGSGSGSGSSPFTRSELRNVVPRGGYYESPQTIMELRAIACVEAQLGEPLREDGPILGVEFDPLPPDAFGAPLAVTDPQKRPSLAYDNKMYERHDVRTNKAIARTFHEYPFLPSQSGIRADVFGQLNLPHLHEPMEGPARTPFPLGNEQPRIHAPQSHSSRVRLLSQPQDKQVIPYPSPPRENDVVPKREPHINITNTGMNSHYTTDHPIVGQEIPYALPGGQVSHNDAVLRMERKRKIDEARVAKEVEAYEMRMRKELEKQDNLRRKSEERLKKEMERQDRERRKEEERLLREKQREEERSKREQRREMERREKFLLKEHLRAEKRRQKEEIRKEKEEERRKAALEKANARRIAKESMELIEDEQLELMELAAASKGLSSIIHIDLDTLQNLESFRDSLCVFPPKSVKLRKPFAIQPWSNSEQNVGNLLMVWRFLITFADVLDLWPFTLDEFVQAFHDYDSRLLGEIHVALLKVIIKDIEDVARTPSTGLGMNQNGAANPGGGHPEIVEGAYAWGFDIRNWQKNLNQLTWPEIFRQLALSAGLGPHLKKRSIAWSYAIDKDEGKSCVDIISTLRNGSAAESAVAKMQERGLLAPRRSRHRLTPGTVKFAAFHVLSLEGSKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDTKLFERIAPSTYCVRDAFRKDPADADSILSEARKKIQIFENGFLAGEDADDVEREEESESDEVDEDPEDDDLVNPLSANQNSEQYDDTNICSSNGKENLGHNIDLIQNEFDTDLPCLPKNGSTGADCPSSVTRPVACGDLNAGNLDQDNMEIDESISGESWILGLAEGEYSDLSVEERLNALVALVGVANEGNSIRVVLEDRLESANALKKQMWADAQIDKVRLKDDNISKLDFPSLTGNKVETQYTYPAAEGHQSPIMLDININDNEASPSTAENQKGAPVALSMPMEKSSSIQDFVIGTGADIPQTQVPAQYSKRSRSQLKSYFAHLAEEMYVYRSLPLGQDRRRNRYWQFVASASSSDPGSGRIFVECHDGKWWLIDSEEAFDSLLTSLDSRGLRESHLRLMLQKIENSFKENVRKRNADCAKNGSKGEVSIKVEASEPFSIPDPNAGSDSPSSILHNLNTDTSEVSSSFKIELGKSESEKKAALRRYHDFQKWLWKECSNSSVLCAMKYGIKRCKPQMDICDICLDLYFVEDSHCSSCHRTFSSNNGFNFSKHAFQCRDKLSKDNCILEYSLPLRTRLLKFLLACMEVSVLSEAFGTNWTDDIRKHWGVKLSKSSSVEELIQILTLFEKALRRDFLSSNFSTTDELLGSSSMLECSGPASTDPESVPVLPWVPLTTAALSLRLFEIDSSISYVKPERLEPSEEKEAREYIRFPSRYTHLKSNREVEPAEFDHDEFTKDKSVPKKIVRSGNKRSRGTNEQGRGKKLAKRVYNSKRDGGRKNAKVTVNLSHKLKQQARGTQGQGAGRGRRTVRKRRVGKRAVEDLLLGHTTANHSSKIDREPLKNLDEEWDREKASPMTPVHIGVAADNSNSAEEVESDYDHAQAVEYDQGNWEVGFNGVPPNRWSRDLVGMSDEDVDASEDDNDNGIEENEDEDSEADVMSEGSDGMGNRVVNVGGSYSALSEDSSD 1751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02741 1751 MobiDBLite consensus disorder prediction 1698 1724 - -
Viun6g02741 1751 MobiDBLite consensus disorder prediction 1574 1598 - -
Viun6g02741 1751 SMART HOX_1 37 99 IPR001356 GO:0003677
Viun6g02741 1751 MobiDBLite consensus disorder prediction 19 44 - -
Viun6g02741 1751 MobiDBLite consensus disorder prediction 1530 1551 - -
Viun6g02741 1751 SMART testlast3 547 606 IPR018501 -
Viun6g02741 1751 MobiDBLite consensus disorder prediction 1 48 - -
Viun6g02741 1751 MobiDBLite consensus disorder prediction 1 18 - -
Viun6g02741 1751 ProSiteProfiles HARE-type HTH domain profile. 729 798 IPR007759 GO:0006355
Viun6g02741 1751 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 938 981 IPR028942 -
Viun6g02741 1751 Coils Coil 372 478 - -
Viun6g02741 1751 CDD homeodomain 40 89 IPR001356 GO:0003677
Viun6g02741 1751 ProSiteProfiles DDT domain profile. 547 606 IPR018501 -
Viun6g02741 1751 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 13 1751 IPR044977 GO:0006357
Viun6g02741 1751 MobiDBLite consensus disorder prediction 827 871 - -
Viun6g02741 1751 Pfam HB1, ASXL, restriction endonuclease HTH domain 729 797 IPR007759 GO:0006355
Viun6g02741 1751 MobiDBLite consensus disorder prediction 386 433 - -
Viun6g02741 1751 MobiDBLite consensus disorder prediction 830 853 - -
Viun6g02741 1751 MobiDBLite consensus disorder prediction 1697 1751 - -
Viun6g02741 1751 Coils Coil 3 23 - -
Viun6g02741 1751 Pfam Homeodomain 38 94 IPR001356 GO:0003677
Viun6g02741 1751 Gene3D - 21 96 - -
Viun6g02741 1751 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1118 1190 IPR028941 -
Viun6g02741 1751 ProSiteProfiles 'Homeobox' domain profile. 35 95 IPR001356 GO:0003677
Viun6g02741 1751 Pfam DDT domain 549 603 IPR018501 -
Viun6g02741 1751 SUPERFAMILY Homeodomain-like 25 94 IPR009057 -
Viun6g02741 1751 MobiDBLite consensus disorder prediction 855 871 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02741 Viun-Chr6 31319839 31330640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02741 31 1681 Homeobox Transcription Factor Family AT1G28420 48.833 0.0 1316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Viun6g02741 WSD 4.9e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02741 - - gmx:100777465 2863.17